RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 EFTUD2Q15029 972 aaKnown RBP eCLIP20.65■□□□□ 0.92e-6■■■■■ 27.7
TOP1MT-206ENST00000518951 RNF187Q5TA31 235 aaPredicted RBP20.65■□□□□ 0.9
TOP1MT-206ENST00000518951 ZNF549Q6P9A3 640 aa20.65■□□□□ 0.9
TOP1MT-206ENST00000518951 LKAAEAR1Q8TD35 194 aa20.65■□□□□ 0.9
TOP1MT-206ENST00000518951 FUT8Q9BYC5 575 aa20.65■□□□□ 0.9
TOP1MT-206ENST00000518951 KCNK6Q9Y257 313 aa20.65■□□□□ 0.9
TOP1MT-206ENST00000518951 PRR19A6NJB7 356 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 YY2O15391 372 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 YKT6O15498 198 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 PCDHGA12O60330 932 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 PBLDP30039 288 aaPredicted RBP20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 ZNF449Q6P9G9 518 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 KIAA0408Q6ZU52 694 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 TRMT10CQ7L0Y3 403 aaKnown RBP20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 KIAA2013Q8IYS2 634 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 KRT222Q8N1A0 295 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 UHMK1Q8TAS1 419 aaKnown RBP20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 AENQ8WTP8 325 aaKnown RBP20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 LINC00615Q96LM1 132 aaPredicted RBP20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 TIMM29Q9BSF4 260 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 KLC4Q9NSK0 619 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 DNAJC16Q9Y2G8 782 aa20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 DNMT3AQ9Y6K1 912 aaPredicted RBP20.64■□□□□ 0.89
TOP1MT-206ENST00000518951 RIPK2O43353 540 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 FOXD2O60548 495 aaPredicted RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 OR56A5P0C7T3 313 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 ITGB6P18564 788 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 STX2P32856 288 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 ADARP55265 1226 aaKnown RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 ELOCQ15369 112 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 INSCQ1MX18 579 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 ZNF658BQ4V348 819 aaPredicted RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 SLC30A9Q6PML9 568 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 DBX2Q6ZNG2 339 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 FAM83HQ6ZRV2 1179 aaPredicted RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 TAF8Q7Z7C8 310 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 GALNT7Q86SF2 657 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 SPNS2Q8IVW8 549 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 FSTL5Q8N475 847 aaPredicted RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 LILRA3Q8N6C8 439 aaPredicted RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 SPATS2LQ9NUQ6 558 aaKnown RBP20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 CSNK1G3Q9Y6M4 447 aa20.63■□□□□ 0.89
TOP1MT-206ENST00000518951 LMO7DNF2Z398 122 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PFDN6O15212 129 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 FFAR2O15552 330 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 EML2O95834 649 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 CD59P13987 128 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PKMP14618 531 aaKnown RBP20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PHBP35232 272 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 ACTR1BP42025 376 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 ACTR1AP61163 376 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 ARHGAP8P85298 464 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 ILF3Q12906 894 aaKnown RBP eCLIP20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 LRP8Q14114 963 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 NFE2L1Q14494 772 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 DEFB133Q30KQ1 61 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 UAP1L1Q3KQV9 507 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 STPG1Q5TH74 334 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 NAPRTQ6XQN6 538 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 STRA8Q7Z7C7 330 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 AMZ2Q86W34 360 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 LRRC6Q86X45 466 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 SFTPA2Q8IWL1 248 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PPM1NQ8N819 430 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 GABPB2Q8TAK5 448 aaPredicted RBP20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 CCM2Q9BSQ5 444 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 MCMBPQ9BTE3 642 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 GSDMCQ9BYG8 508 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 GALPQ9UBC7 116 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 FAM8A1Q9UBU6 413 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 GNPTGQ9UJJ9 305 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 VPS9D1Q9Y2B5 631 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 BTBD3Q9Y2F9 522 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 MGAT4DA6NG13 374 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 NIPSNAP2O75323 286 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 ESR1P03372 595 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 MCM3P25205 808 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 RBM20Q5T481 1227 aaKnown RBP20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PTRHD1Q6GMV3 140 aaKnown RBP20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 SLC26A11Q86WA9 606 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 CTAGE3PQ8IX95 158 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 OR2L2Q8NH16 312 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 CDKL2Q92772 493 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 ACSS3Q9H6R3 686 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 TAAR2Q9P1P5 351 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 TBC1D29Q9UFV1 150 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 MED16Q9Y2X0 877 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PCDHB1Q9Y5F3 818 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PCDHGB2Q9Y5G2 931 aa20.62■□□□□ 0.89
TOP1MT-206ENST00000518951 PTPRZ1P23471 2315 aaPredicted RBP20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 DMXL1Q9Y485 3027 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 QSOX1O00391 747 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 TRIM38O00635 465 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 FAM155BO75949 473 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 TRIM16O95361 564 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 CD151P48509 253 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 CLCNKAP51800 687 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 DMPKQ09013 629 aa20.61■□□□□ 0.89
TOP1MT-206ENST00000518951 SLC29A2Q14542 456 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms