RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
PABPC1-202ENST00000517403 KIR2DS5A0A0G2JLQ3 304 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 A0A0G2JNG1 304 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 OR2AG2A6NM03 316 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 TMX2-CTNND1H3BSU7 103 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 KIR2DS3K7RE56 304 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 CAPN5O15484 640 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PJA2O43164 708 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 HCRTR1O43613 425 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 DNAJB5O75953 348 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 ITGB2P05107 769 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 CTSBP07858 339 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 ANKRD34CP0C6C1 535 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 FOLR1P15328 257 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PSMB4P28070 264 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PBLDP30039 288 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 CSTF2P33240 577 aaKnown RBP eCLIP8.47□□□□□ -1.053e-7■□□□□ 8.4
PABPC1-202ENST00000517403 STAT5AP42229 794 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 CAPZBP47756 277 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 EPHA4P54764 986 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 FOXL2P58012 376 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 RPS18P62269 152 aaKnown RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 SPARCL1Q14515 664 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 KIR2DS5Q14953 304 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PDK1Q15118 436 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 SLC1A5Q15758 541 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 CLPPQ16740 277 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 INSCQ1MX18 579 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 ZFYVE27Q5T4F4 411 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 ABRAXAS1Q6UWZ7 409 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 FAM92BQ6ZTR7 304 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 BBS12Q6ZW61 710 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 DET1Q7L5Y6 550 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 LRRTM4Q86VH4 590 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 GAS2L3Q86XJ1 694 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PHYKPLQ8IUZ5 450 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 TMEM139Q8IV31 216 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 KLHDC8BQ8IXV7 354 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 SLC38A9Q8NBW4 561 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 GALNT6Q8NCL4 622 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 ACRBPQ8NEB7 543 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 DDHD1Q8NEL9 900 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 IPMKQ8NFU5 416 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 OR10G6Q8NH81 332 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 STARD8Q92502 1023 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 IQCDQ96DY2 449 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 FCRL5Q96RD9 977 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 TIMM29Q9BSF4 260 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 FICDQ9BVA6 458 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 TRIM55Q9BYV6 548 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 GPR63Q9BZJ6 419 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 B3GNT4Q9C0J1 378 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 TSPY26PQ9H489 355 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 ZNF768Q9H5H4 540 aaKnown RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 RMI1Q9H9A7 625 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PIH1D1Q9NWS0 290 aaKnown RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 KCTD5Q9NXV2 234 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 FAM8A1Q9UBU6 413 aa8.47□□□□□ -1.05
PABPC1-202ENST00000517403 PACSIN2Q9UNF0 486 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 R3HDM2Q9Y2K5 976 aaKnown RBP8.47□□□□□ -1.05
PABPC1-202ENST00000517403 GRID2IPA4D2P6 1211 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 PDZK1P1A8MUH7 402 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 PSTPIP1O43586 416 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 UBXN7O94888 489 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 EBLN1P0CF75 366 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 RNF224P0DH78 156 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 TPBGLP0DKB5 382 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 XRCC1P18887 633 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-202ENST00000517403 CES1P23141 567 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 VAMP1P23763 118 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 CD82P27701 267 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 HMGCLP35914 325 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 ARHGAP25P42331 645 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 MMP16P51512 607 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 ZNF140P52738 457 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-202ENST00000517403 GDF10P55107 478 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 OTUD4Q01804 1114 aaKnown RBP8.46□□□□□ -1.06
PABPC1-202ENST00000517403 TLE1Q04724 770 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 TMEM115Q12893 351 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-202ENST00000517403 ABRQ12979 859 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 PEX6Q13608 980 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 IL10RAQ13651 578 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 TRIM14Q14142 442 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 IGFBP7Q16270 282 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 RPE65Q16518 533 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 ZNF789Q5FWF6 425 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 CPZQ66K79 652 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 PRUNE1Q86TP1 453 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 SLC9B2Q86UD5 537 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 TRAPPC5Q8IUR0 188 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 MAP7D3Q8IWC1 876 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 RHOT2Q8IXI1 618 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 RAVER1Q8IY67 606 aaKnown RBP8.46□□□□□ -1.06
PABPC1-202ENST00000517403 KATNAL2Q8IYT4 538 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 NLGN4XQ8N0W4 816 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 IL22RA1Q8N6P7 574 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 LRRC57Q8N9N7 239 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 LMNTD1Q8N9Z9 388 aa8.46□□□□□ -1.06
PABPC1-202ENST00000517403 NLGN4YQ8NFZ3 816 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-202ENST00000517403 CCDC110Q8TBZ0 833 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms