RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SPATS2LQ9NUQ6 558 aaKnown RBP-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 TMOD4Q9NZQ9 345 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLC39A10Q9ULF5 831 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 SUFUQ9UMX1 484 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 A0A1W2PPK0 400 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 A0A1W2PR80 420 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 GSAPA4D1B5 854 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 MFSD2BA6NFX1 497 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 TAF4O00268 1085 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 DNM1LO00429 736 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 TFECO14948 347 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 OGTO15294 1046 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 GPR39O43194 453 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 WISP2O76076 250 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 MLYCDO95822 493 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 CYC1P08574 325 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 RRM1P23921 792 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 PIK3CAP42336 1068 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 MEOX2P50222 304 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 ATP4BP51164 291 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 ERVPABLB-1P60509 514 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 COG7P83436 770 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 UNC119Q13432 240 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 ARHGEF6Q15052 776 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 MTHFSDQ2M296 383 aaKnown RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 EFCAB2Q5VUJ9 269 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF280DQ6N043 979 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 KCTD18Q6PI47 426 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 B3GNT9Q6UX72 402 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 PLEKHM3Q6ZWE6 761 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 BTN2A1Q7KYR7 527 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 LRRC8DQ7L1W4 858 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 AMIGO1Q86WK6 493 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 HIPK1Q86Z02 1210 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 PCDH20Q8N6Y1 951 aaKnown RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF525Q8N782 197 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 RELL2Q8NC24 303 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 PSPC1Q8WXF1 523 aaKnown RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 NSMAFQ92636 917 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 PHF21AQ96BD5 680 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 RHBDF1Q96CC6 855 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 MVB12AQ96EY5 273 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 MAGEB18Q96M61 343 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLX1AQ9BQ83 275 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 TRIM31Q9BZY9 425 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 ACAD9Q9H845 621 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D23Q9NUY8 699 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 RCOR1Q9UKL0 485 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 CSNK1G3Q9Y6M4 447 aa-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 FN1P02751 2386 aaKnown RBP-1.12□□□□□ -2.59
RNU6-539P-201ENST00000516665 OR5K3A6NET4 321 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 EPOPA6NHQ4 379 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZSCAN5BA6NJL1 495 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 NPIPB13A6NJU9 1138 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 USP27XA6NNY8 438 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 COLCA2A8K830 154 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 COQ9O75208 318 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 CBX6O95503 412 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 CER1O95813 267 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 TFAP2AP05549 437 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 LYL1P12980 280 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 LGALS3P17931 250 aaKnown RBP-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ELK3P41970 407 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 SKIV2L2P42285 1042 aaKnown RBP-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 PTPN9P43378 593 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 RPE65Q16518 533 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 TCTN1Q2MV58 587 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 GXYLT1Q4G148 440 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 BRDTQ58F21 947 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 FAXCQ5TGI0 409 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 CES5AQ6NT32 575 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 CGB2Q6NT52 195 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZFP2Q6ZN57 461 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ARHGAP22Q7Z5H3 698 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 C5orf24Q7Z6I8 188 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 MAP7D3Q8IWC1 876 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 SCN4BQ8IWT1 228 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF709Q8N972 641 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 AGBL3Q8NEM8 1001 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 OR4Q3Q8NH05 313 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ARHGAP45Q92619 1136 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 IGSF8Q969P0 613 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 MRRFQ96E11 262 aaKnown RBP-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 CNRIP1Q96F85 164 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 DGAT2Q96PD7 388 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 TECTBQ96PL2 329 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 TMEM120AQ9BXJ8 343 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 LRRCC1Q9C099 1032 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 SHARPINQ9H0F6 387 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 LRMDAQ9H2I8 198 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF230Q9UIE0 474 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 MOKQ9UQ07 419 aa-1.13□□□□□ -2.59
RNU6-539P-201ENST00000516665 HRNRQ86YZ3 2850 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3DA0A087WVF3 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3IA0A087WXS9 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3EA0A087X179 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3KA0A087X1G2 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 MED19A0JLT2 244 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3BA6NDS4 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3FA6NER0 549 aaPredicted RBP-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms