RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 SNX32Q86XE0 403 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 SCUBE1Q8IWY4 988 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 ULK2Q8IYT8 1036 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 RP9Q8TA86 221 aaKnown RBP15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 SCAMP4Q969E2 229 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 ESAMQ96AP7 390 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 CLPTM1LQ96KA5 538 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 C3orf30Q96M34 536 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 KCNA7Q96RP8 456 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 KCTD5Q9NXV2 234 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 NOP53Q9NZM5 478 aaKnown RBP15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 KLHL42Q9P2K6 505 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 ADAMTS6Q9UKP5 1117 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 SARDHQ9UL12 918 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 PEX11AO75192 247 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 MLYCDO95822 493 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 ITGAXP20702 1163 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 MMP12P39900 470 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 ETV3P41162 512 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 HERC3Q15034 1050 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 PARS2Q7L3T8 475 aaKnown RBP15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 DTX3LQ8TDB6 740 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 TWIST2Q8WVJ9 160 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 FAM161BQ96MY7 647 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 PANX3Q96QZ0 392 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 HGH1Q9BTY7 390 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 FAM126AQ9BYI3 521 aaPredicted RBP15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 ZFP14Q9HCL3 533 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 NFKBIL1Q9UBC1 381 aaPredicted RBP15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 CDH7Q9ULB5 785 aa15.22■□□□□ 0.03
THUMPD3-210ENST00000515662 RAD51BO15315 384 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 FFAR2O15552 330 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 HLA-EP13747 358 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 CYLC2Q14093 348 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 KPNB1Q14974 876 aaKnown RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 HNRNPA1L2Q32P51 320 aaKnown RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 NAIF1Q69YI7 327 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 SYVN1Q86TM6 617 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 WDR60Q8WVS4 1066 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 PPP2R3CQ969Q6 453 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 RAD18Q9NS91 495 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 MBD1Q9UIS9 605 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 OARD1Q9Y530 152 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 MUC22E2RYF6 1773 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 A0A088AWK7 358 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 ATP6AP2A0A1C7CYW4 349 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 KPNA3O00505 521 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 PIP5K1BO14986 540 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 UBDO15205 165 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 ATP6AP2O75787 350 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 ESRRBO95718 433 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 PRNPP04156 253 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 S100BP04271 92 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 OR56A5P0C7T3 313 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 CBSLP0DN79 551 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 CCR7P32248 378 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 CBSP35520 551 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 HYAL1Q12794 435 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 ANKRD54Q6NXT1 300 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 TECPR1Q7Z6L1 1165 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 PDPRQ8NCN5 879 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 TUBB1Q9H4B7 451 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 MRGBPQ9NV56 204 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 ZNF225Q9UK10 706 aa15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 KIF26AQ9ULI4 1882 aaPredicted RBP15.21■□□□□ 0.03
THUMPD3-210ENST00000515662 COL4A3Q01955 1670 aa15.21■□□□□ 0.02
THUMPD3-210ENST00000515662 EDDM13A0A1B0GTR0 161 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 GPC4O75487 556 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 ATP1B2P14415 290 aaPredicted RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 PRDX3P30048 256 aaKnown RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 METAP1P53582 386 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 FCHO2Q0JRZ9 810 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 SQLEQ14534 574 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 PCBP2Q15366 365 aaKnown RBP eCLIP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 RBBP7Q16576 425 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 C18orf21Q32NC0 220 aaPredicted RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 HENMT1Q5T8I9 393 aaKnown RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 ERAP2Q6P179 960 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 DET1Q7L5Y6 550 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 TRAM1L1Q8N609 369 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 RIOK2Q9BVS4 552 aaKnown RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 AKTIPQ9H8T0 292 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 SLC7A8Q9UHI5 535 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 PPM1HQ9ULR3 514 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 TNPO3Q9Y5L0 923 aaKnown RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 PTGDR2Q9Y5Y4 395 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 H0Y3Z8 333 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 CRCPO75575 148 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 AOAHP28039 575 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 AKT1P31749 480 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 ZNF234Q14588 700 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 GRIN2CQ14957 1233 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 PHKG1Q16816 387 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 KHDC1Q4VXA5 237 aaKnown RBP15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 LIPIQ6XZB0 460 aa15.2■□□□□ 0.02
THUMPD3-210ENST00000515662 GPRIN3Q6ZVF9 776 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms