RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 SMC3Q9UQE7 1217 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TMEM5Q9Y2B1 443 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 DLGAP4Q9Y2H0 992 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CHD6Q8TD26 2715 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SOS1Q07889 1333 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 IGSF1Q8N6C5 1336 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DNAH12Q6ZR08 3092 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 MRC1P22897 1456 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 GPR75-ASB3A0A0A6YYF3 556 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 A0A1B0GUV1 79 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 A0A1W2PPQ1 181 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 I6L893 689 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SLC30A4O14863 429 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KCNN4O15554 427 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KRT33AO76009 404 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 S1PR1P21453 382 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 HADHAP40939 763 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 NUDT6P53370 316 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SRSF4Q08170 494 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 IFT88Q13099 833 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 IDI1Q13907 227 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 MANEAQ5SRI9 462 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 OTUD1Q5VV17 481 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ZNF626Q68DY1 528 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 MOB3CQ70IA8 216 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CHST9Q7L1S5 443 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 TAOK1Q7L7X3 1001 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 TDRD5Q8NAT2 981 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DNAAF1Q8NEP3 725 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 APPL2Q8NEU8 664 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 PRSS3P2Q8NHM4 247 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 B4GALNT2Q8NHY0 566 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SLC25A23Q9BV35 468 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 IL25Q9H293 177 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DDX31Q9H8H2 851 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 AMACRQ9UHK6 382 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 MYOM3Q5VTT5 1437 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ABCC11Q96J66 1382 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 FAM237BA0A1B0GVD1 139 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DDTLA6NHG4 134 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 C19orf81C9J6K1 198 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 J3KR12 359 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 TCERG1O14776 1098 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 PLRG1O43660 514 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DKC1O60832 514 aaKnown RBP eCLIP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ENTPD3O75355 529 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SEC31AO94979 1220 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 PEPDP12955 493 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CIITAP33076 1130 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 HARS2P49590 506 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 HNRNPH2P55795 449 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 NEDD9Q14511 834 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CBWD6Q4V339 395 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CBWD3Q5JTY5 395 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DPY19L2P1Q6NXN4 242 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CCBE1Q6UXH8 406 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 IKBIPQ70UQ0 350 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 BEST3Q8N1M1 668 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 FRMD1Q8N878 549 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 TSPAN14Q8NG11 270 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SPATA22Q8NHS9 363 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 LPAR1Q92633 364 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 NEUROD6Q96NK8 337 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KCNK15Q9H427 330 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 RANGRFQ9HD47 186 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 PAG1Q9NWQ8 432 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 METP08581 1390 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 LAMA5O15230 3695 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CGNL1Q0VF96 1302 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 A0A1W2PS18 150 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 DNAJC9-AS1A6NH13 148 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 O00370 1275 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 AHCYL1O43865 530 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ERAL1O75616 437 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SKILP12757 684 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ZNF12P17014 697 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KCNA5P22460 613 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CCKBRP32239 447 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 NAGLUP54802 743 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 RUNX1T1Q06455 604 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ACSM2AQ08AH3 577 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KIF5AQ12840 1032 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CTTNQ14247 550 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SETMARQ53H47 684 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KRTCAP3Q53RY4 240 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ACSM2BQ68CK6 577 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 PRR27Q6MZM9 219 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 KCTD18Q6PI47 426 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 SYNE3Q6ZMZ3 975 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 MON1BQ7L1V2 547 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 CTU1Q7Z7A3 348 aaKnown RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 NBPF5PQ86XG9 351 aaPredicted RBP1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ADGRF4Q8IZF3 695 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 POC5Q8NA72 575 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 GJC3Q8NFK1 279 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 ITFG2Q969R8 447 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 HMCESQ96FZ2 354 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 MARK4Q96L34 752 aa1.67□□□□□ -2.14
AC025539.1-201ENST00000515343 BARD1Q99728 777 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms