RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 CXADRP78310 365 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 SQSTM1Q13501 440 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 LONRF2Q1L5Z9 754 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 ZRANB3Q5FWF4 1079 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 TMEM71Q6P5X7 295 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 TMEM26Q6ZUK4 368 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 NXPE1Q8N323 547 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 CCDC89Q8N998 374 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 JPH3Q8WXH2 748 aaPredicted RBP18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 TMEM159Q96B96 161 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 CXorf40BQ96DE9 158 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 PRORYQ9H606 182 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 CPNE5Q9HCH3 593 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 RAB6BQ9NRW1 208 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 AKAP7Q9P0M2 348 aaPredicted RBP18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 PCDHGA7Q9Y5G6 932 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 SLC30A1Q9Y6M5 507 aa18.56■□□□□ 0.56
LPCAT1-206ENST00000514484 GOLGA6L3A6NEY3 463 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 C9orf172C9J069 976 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 E7EVH7 732 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 HGSO14964 777 aaPredicted RBP18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 PSMD3O43242 534 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 SGTAO43765 313 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 CEP104O60308 925 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 FDFT1P37268 417 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 ARSDP51689 593 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 GFERP55789 205 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 DMPKQ09013 629 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 CLN3Q13286 438 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 TRA2AQ13595 282 aaKnown RBP eCLIP18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 TGIF1Q15583 401 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 AGAP9Q5VTM2 703 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 ABRAXAS1Q6UWZ7 409 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 PPP1R21Q6ZMI0 780 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 SNX20Q7Z614 316 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 FAM129CQ86XR2 697 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 DNAAF3Q8N9W5 541 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 AVL9Q8NBF6 648 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 UBE2Q2Q8WVN8 375 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 ULK4Q96C45 1275 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 DCUN1D1Q96GG9 259 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 NLE1Q9NVX2 485 aaPredicted RBP18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 CFAP20Q9Y6A4 193 aaKnown RBP18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 IGSF10Q6WRI0 2623 aa18.55■□□□□ 0.56
LPCAT1-206ENST00000514484 OR51F1A6NGY5 319 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 EFCAB7A8K855 629 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 AGAP14A8MT82 685 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 FGF3P11487 239 aaPredicted RBP18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 CSTF2P33240 577 aaKnown RBP eCLIP18.54■□□□□ 0.564e-6■■■■■ 30.3
LPCAT1-206ENST00000514484 HALP42357 657 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 GPR18Q14330 331 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 CCNG2Q16589 344 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 BROXQ5VW32 411 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 DUS1LQ6P1R4 473 aaKnown RBP18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 WDR74Q6RFH5 385 aaPredicted RBP18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 WASH2PQ6VEQ5 465 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 LILRA3Q8N6C8 439 aaPredicted RBP18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 AGBL5Q8NDL9 886 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 RSC1A1Q92681 617 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 ART4Q93070 314 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 DPYSL5Q9BPU6 564 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 DPH1Q9BZG8 443 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 WASH6PQ9NQA3 447 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 POT1Q9NUX5 634 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 OCIAD1Q9NX40 245 aa18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.54■□□□□ 0.56
LPCAT1-206ENST00000514484 ERI2A8K979 691 aaKnown RBP18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 NVLO15381 856 aaKnown RBP18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 UBXN7O94888 489 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 APRTP07741 180 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 ACRV1P26436 265 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 RPL22P35268 128 aaKnown RBP18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 KCNJ1P48048 391 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 CDH17Q12864 832 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 SRSF6Q13247 344 aaKnown RBP18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 SEMA5AQ13591 1074 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 RPE65Q16518 533 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 BCL7AQ4VC05 210 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 XKR5Q6UX68 686 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 TAS2R42Q7RTR8 314 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 SERPINA9Q86WD7 417 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 ZFAND4Q86XD8 727 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 PIANPQ8IYJ0 282 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 STYXQ8WUJ0 223 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 ZNF514Q96K75 400 aaPredicted RBP18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 COPS8Q99627 209 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 WWP1Q9H0M0 922 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 UCK1Q9HA47 277 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 SLC40A1Q9NP59 571 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 IMP3Q9NV31 184 aaKnown RBP18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 ZDHHC3Q9NYG2 299 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 PAK5Q9P286 719 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 SLC2A6Q9UGQ3 507 aa18.53■□□□□ 0.56
LPCAT1-206ENST00000514484 MN1Q10571 1320 aaPredicted RBP18.52■□□□□ 0.56
LPCAT1-206ENST00000514484 SMG1Q96Q15 3661 aaKnown RBP18.52■□□□□ 0.56
LPCAT1-206ENST00000514484 TRBV5-4A0A0C4DH59 114 aa18.52■□□□□ 0.56
LPCAT1-206ENST00000514484 MGAT4DA6NG13 374 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms