RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ILKQ13418 452 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 PEX6Q13608 980 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 ITGA9Q13797 1035 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 PTPRCAPQ14761 206 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 CHRNA6Q15825 494 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 SKIDA1Q1XH10 827 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 DEFB133Q30KQ1 61 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 KBTBD12Q3ZCT8 623 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 ATP13A5Q4VNC0 1218 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 PYCR3Q53H96 274 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 ZCCHC8Q6NZY4 707 aaKnown RBP8.22□□□□□ -1.09
CCL28-204ENST00000514421 OGFOD3Q6PK18 319 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 DOK6Q6PKX4 331 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UNC5AQ6ZN44 842 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 TAF8Q7Z7C8 310 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 SLC26A11Q86WA9 606 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 LRRC6Q86X45 466 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 FAM46DQ8NEK8 389 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 OR52K1Q8NGK4 314 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 GSDMBQ8TAX9 411 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 GPBAR1Q8TDU6 330 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 STYXQ8WUJ0 223 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 CKAP2Q8WWK9 683 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 CHMP6Q96FZ7 201 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 PDXPQ96GD0 296 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 APOLD1Q96LR9 279 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 VPS35Q96QK1 796 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 GSDMCQ9BYG8 508 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 TMEM168Q9H0V1 697 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A7Q9HAW7 530 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A10Q9HAW8 530 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A8Q9HAW9 530 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 CASS4Q9NQ75 786 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 MKS1Q9NXB0 559 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 NCKIPSDQ9NZQ3 722 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 ATXN10Q9UBB4 475 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 ZNHIT2Q9UHR6 403 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 TPRP12270 2363 aaKnown RBP8.22□□□□□ -1.09
CCL28-204ENST00000514421 MAGEB16A2A368 324 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 MROH6A6NGR9 719 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 NDUFAB1O14561 156 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GRID2O43424 1007 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 VEGFDO43915 354 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 DNAJC6O75061 913 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 DKK1O94907 266 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CDK14O94921 469 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CELA2BP08218 269 aaPredicted RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 ADRB1P08588 477 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CKMT1AP12532 417 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 ACP1P24666 158 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 PSMA3P25788 255 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CNTFP26441 200 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GRIA1P42261 906 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 MSH2P43246 934 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GNPDA1P46926 289 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 SEC24CP53992 1094 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 HNRNPH2P55795 449 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 TMPRSS15P98073 1019 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 DAB2P98082 770 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 XIAPP98170 497 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 E2F1Q01094 437 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CTBSQ01459 385 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TMEM115Q12893 351 aaPredicted RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 ILF3Q12906 894 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCL28-204ENST00000514421 DNAJC3Q13217 504 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 POU6F1Q14863 301 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TMED2Q15363 201 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GPR33Q49SQ1 333 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 LDLRAP1Q5SW96 308 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 C6orf132Q5T0Z8 1188 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CERCAMQ5T4B2 595 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TTC19Q6DKK2 380 aaPredicted RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 C6orf89Q6UWU4 347 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 FAM151BQ6UXP7 276 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TIFABQ6ZNK6 161 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 MARK2Q7KZI7 788 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 NLRP9Q7RTR0 991 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 YTHDF3Q7Z739 585 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 PIGWQ7Z7B1 504 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 ADGRG6Q86SQ4 1221 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TMEM135Q86UB9 458 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TRIM74Q86UV6 250 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GALNT13Q8IUC8 556 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 PHYKPLQ8IUZ5 450 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 SRRM1Q8IYB3 904 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 PNPLA1Q8N8W4 532 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 BANPQ8N9N5 519 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 OR13C4Q8NGS5 318 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CCL4L1Q8NHW4 92 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GDAP1Q8TB36 358 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 ZNF473Q8WTR7 871 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 ADAMTS14Q8WXS8 1223 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 MTBPQ96DY7 904 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 STAMBPL1Q96FJ0 436 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 CDKN2AIPNLQ96HQ2 116 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 OR2M4Q96R27 311 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 BOCQ9BWV1 1114 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms