RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 RTP5Q14D33 572 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 ZNF542PQ5EBM4 170 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 NEPROQ6NW34 567 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 CES3Q6UWW8 571 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 LRRC69Q6ZNQ3 347 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 SERPINA9Q86WD7 417 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 RELL1Q8IUW5 271 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 PWWP2AQ96N64 755 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 SLC13A1Q9BZW2 595 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 PPANQ9NQ55 473 aaKnown RBP19.89■□□□□ 0.77
USP53-208ENST00000514305 NSMCE4AQ9NXX6 385 aa19.89■□□□□ 0.77
USP53-208ENST00000514305 TRBV5-4A0A0C4DH59 114 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 ZCWPW2A0A1B0GU75 182 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 KLHL33A6NCF5 533 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 SCAMP1O15126 338 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 NDUFS3O75489 264 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 CDK14O94921 469 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 CSF2P04141 144 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 IVLP07476 585 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 CTSEP14091 401 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 OGNP20774 298 aaKnown RBP19.88■□□□□ 0.77
USP53-208ENST00000514305 FOXN2P32314 431 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 NSG1P42857 185 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 DUSP3P51452 185 aaPredicted RBP19.88■□□□□ 0.77
USP53-208ENST00000514305 SRP54P61011 504 aaKnown RBP19.88■□□□□ 0.77
USP53-208ENST00000514305 TMEM115Q12893 351 aaPredicted RBP19.88■□□□□ 0.77
USP53-208ENST00000514305 HP1BP3Q5SSJ5 553 aaPredicted RBP19.88■□□□□ 0.77
USP53-208ENST00000514305 GPRC6AQ5T6X5 926 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 STEAP4Q687X5 459 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 ZNF449Q6P9G9 518 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 KDM7AQ6ZMT4 941 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 CYS1Q717R9 158 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 KCNMB4Q86W47 210 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 GPR150Q8NGU9 434 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 TSSK1BQ9BXA7 367 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 VPS37BQ9H9H4 285 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 CNOT6Q9ULM6 557 aaKnown RBP19.88■□□□□ 0.77
USP53-208ENST00000514305 SLC17A4Q9Y2C5 497 aa19.88■□□□□ 0.77
USP53-208ENST00000514305 CCL22O00626 93 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 GAPDHSO14556 408 aaPredicted RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 RRP8O43159 456 aaKnown RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 NME1P15531 152 aaKnown RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 COL9A2Q14055 689 aaPredicted RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 FZD2Q14332 565 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 WDR93Q6P2C0 686 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 UNC5AQ6ZN44 842 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 C3orf62Q6ZUJ4 267 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 GALNT13Q8IUC8 556 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 RBFAQ8N0V3 343 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 PELI3Q8N2H9 469 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 SDR16C5Q8N3Y7 309 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 DCBLD1Q8N8Z6 715 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 ZNF548Q8NEK5 533 aaPredicted RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 CERS2Q96G23 380 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 APOLD1Q96LR9 279 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 FCRL3Q96P31 734 aaPredicted RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 LGR4Q9BXB1 951 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 ANKZF1Q9H8Y5 726 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 GPR34Q9UPC5 381 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 DNMT3AQ9Y6K1 912 aaPredicted RBP19.87■□□□□ 0.77
USP53-208ENST00000514305 DGKBQ9Y6T7 804 aa19.87■□□□□ 0.77
USP53-208ENST00000514305 LRRK1Q38SD2 2015 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 PRSS38A1L453 326 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 KCNJ13O60928 360 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 BANF1O75531 89 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 AP2A2O94973 939 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 MT-CO3P00414 261 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 GP1BAP07359 652 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 GIMD1P0DJR0 217 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 VCLP18206 1134 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 STX2P32856 288 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 ARCN1P48444 511 aaKnown RBP19.86■□□□□ 0.77
USP53-208ENST00000514305 MGAT5Q09328 741 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 MAP9Q49MG5 647 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 DOK6Q6PKX4 331 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 KIAA0408Q6ZU52 694 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 LRRC6Q86X45 466 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 HID1Q8IV36 788 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 AGGF1Q8N302 714 aaeCLIP19.86■□□□□ 0.77
USP53-208ENST00000514305 ABCG4Q9H172 646 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 FAM96AQ9H5X1 160 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 INTS10Q9NVR2 710 aaKnown RBP19.86■□□□□ 0.77
USP53-208ENST00000514305 NCKIPSDQ9NZQ3 722 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 SPASTQ9UBP0 616 aa19.86■□□□□ 0.77
USP53-208ENST00000514305 TMEM202A6NGA9 273 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 OR51F1A6NGY5 319 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 KMOO15229 486 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 NUAK1O60285 661 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 CEACAM5P06731 702 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 GSTM1P09488 218 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 OR56A5P0C7T3 313 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 ATP1B2P14415 290 aaPredicted RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 JUNDP17535 347 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 HK3P52790 923 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 GSTM4Q03013 218 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 LRP8Q14114 963 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 ELOCQ15369 112 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 ERCC6LQ2NKX8 1250 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 ZCCHC8Q6NZY4 707 aaKnown RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 PACS1Q6VY07 963 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms