RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MANEALQ5VSG8 457 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 KANK2Q63ZY3 851 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 PIGZQ86VD9 579 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TMC8Q8IU68 726 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 OR2T34Q8NGX1 318 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 OR2T3Q8NH03 318 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ADI1Q9BV57 179 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TNKS2Q9H2K2 1166 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TUBB1Q9H4B7 451 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 IGFLR1Q9H665 355 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CARS2Q9HA77 564 aaKnown RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF69Q9UC07 566 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CROTQ9UKG9 612 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 PACSIN3Q9UKS6 424 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 A0A1W2PPW3 197 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 MYBPHLA2RUH7 354 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 FAM221BA6H8Z2 402 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 OPHN1O60890 802 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 OXSR1O95747 527 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 AGR2O95994 175 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 GOT2P00505 430 aaKnown RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 GFAPP14136 432 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CHRM3P20309 590 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SLC6A2P23975 617 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 HPCAL1P37235 193 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SLC7A9P82251 487 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 GRIK2Q13002 908 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 DUSP4Q13115 394 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ATP1A4Q13733 1029 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 MSANTD2Q6P1R3 559 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 TMEM207Q6UWW9 146 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SCARA5Q6ZMJ2 495 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 STRADAQ7RTN6 431 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 DNAJB7Q7Z6W7 309 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ACOT1Q86TX2 421 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 MAP7D3Q8IWC1 876 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SPARTQ8N0X7 666 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF567Q8N184 647 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CPA6Q8N4T0 437 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 C2CD4AQ8NCU7 369 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ABHD11Q8NFV4 315 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 TTC9Q92623 222 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 RDH12Q96NR8 316 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 TCF12Q99081 682 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 LRRC3Q9BY71 257 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 WDR55Q9H6Y2 383 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SP140LQ9H930 580 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CXorf21Q9HAI6 301 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SDR39U1Q9NRG7 319 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 INTS10Q9NVR2 710 aaKnown RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 A0A0U1RQS6 177 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 BBIP1A8MTZ0 92 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 F8W810 466 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SEC24AO95486 1093 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 VNN2O95498 520 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 OLFM2O95897 454 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 APOA4P06727 396 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 KCNA5P22460 613 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CHMP24386 653 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 HTR1BP28222 390 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PSMD7P51665 324 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF135P52742 658 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 C19orf57Q0VDD7 668 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 FADDQ13158 208 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SQLEQ14534 574 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 GBX1Q14549 363 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PDGFRLQ15198 375 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 GOLGA7BQ2TAP0 167 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CLEC20AQ6ZU45 233 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ZC3H7AQ8IWR0 971 aaKnown RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PEX5LQ8IYB4 626 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 AUTS2Q8WXX7 1259 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 LPGAT1Q92604 370 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ATP2A3Q93084 1043 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 MOCOSQ96EN8 888 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 AGAP2Q99490 1192 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SEPT5Q99719 369 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 SLC30A3Q99726 388 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PCDHAC1Q9H158 963 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 FANCFQ9NPI8 374 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 NPAP1Q9NZP6 1156 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 TBC1D14Q9P2M4 693 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PCSK1NQ9UHG2 260 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 TMEFF2Q9UIK5 374 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 IFT52Q9Y366 437 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 A3GALT2U3KPV4 340 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ANHXE9PGG2 379 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 APOL1O14791 398 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 KCNN4O15554 427 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 KCNK2O95069 426 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 BAG2O95816 211 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 C2P06681 752 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 RHOP08100 348 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CD19P15391 556 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 CYP2F1P24903 491 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 MAGEA2P43356 314 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PPM1FP49593 454 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-205ENST00000514271 ARPP19P56211 112 aa7.33□□□□□ -1.24
CLIP1-205ENST00000514271 PSME3P61289 254 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms