RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ELOAQ14241 798 aaKnown RBP13.64□□□□□ -0.23
SPCS3-204ENST00000513139 KLHL35Q6PF15 583 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 MR1Q95460 341 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 MARVELD3Q96A59 401 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 MRFAP1L1Q96HT8 127 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 BARD1Q99728 777 aaKnown RBP13.64□□□□□ -0.23
SPCS3-204ENST00000513139 HAUS2Q9NVX0 235 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 ENTPD4Q9Y227 616 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 CHKBQ9Y259 395 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 LUC7L2Q9Y383 392 aaKnown RBP13.64□□□□□ -0.23
SPCS3-204ENST00000513139 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPCS3-204ENST00000513139 MED13LQ71F56 2210 aa13.64□□□□□ -0.23
SPCS3-204ENST00000513139 ZNF185O15231 689 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 VEGFDO43915 354 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 SKILP12757 684 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 PCK1P35558 622 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 VAV2P52735 878 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TUBB4BP68371 445 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 HSD11B2P80365 405 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 ZBED6P86452 979 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TBX2Q13207 712 aaPredicted RBP13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TUBB2AQ13885 445 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 IHHQ14623 411 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 KCNAB1Q14722 419 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 NAA30Q147X3 362 aaPredicted RBP13.63□□□□□ -0.23
SPCS3-204ENST00000513139 PLEKHN1Q494U1 663 aaPredicted RBP13.63□□□□□ -0.23
SPCS3-204ENST00000513139 BOLA3Q53S33 107 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TDRD12Q587J7 1177 aaKnown RBP13.63□□□□□ -0.23
SPCS3-204ENST00000513139 ZNF569Q5MCW4 686 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 PDPK2PQ6A1A2 396 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 ADGRG6Q86SQ4 1221 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 LRRTM4Q86VH4 590 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 D2HGDHQ8N465 521 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 CXorf40BQ96DE9 158 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 CD180Q99467 661 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 ZSCAN5AQ9BUG6 496 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TUBB2BQ9BVA1 445 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 NLNQ9BYT8 704 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 PCDH9Q9HC56 1237 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
SPCS3-204ENST00000513139 LATS2Q9NRM7 1088 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TCFL5Q9UL49 500 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 MYO6Q9UM54 1294 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 SNX7Q9UNH6 387 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 B3GNT3Q9Y2A9 372 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 DOCK10Q96BY6 2186 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 ZFHX3Q15911 3703 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 PCM1Q15154 2024 aa13.63□□□□□ -0.23
SPCS3-204ENST00000513139 TLCD2A6NGC4 264 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 OR52A4PA6NMU1 304 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 ANKRD66B4E2M5 251 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 SCRG1O75711 98 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 EBLN1P0CF75 366 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 FERP16591 822 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 IDSP22304 550 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 FECHP22830 423 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 RPL10P27635 214 aaKnown RBP13.62□□□□□ -0.23
SPCS3-204ENST00000513139 ARL4DP49703 201 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 DCDC1P59894 354 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 PPP1CAP62136 330 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 GPS2Q13227 327 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 SEPT7Q16181 437 aaKnown RBP13.62□□□□□ -0.23
SPCS3-204ENST00000513139 ASIC2Q16515 512 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 CRTC3Q6UUV7 619 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 IGFL3Q6UXB1 125 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 TMEM126BQ8IUX1 230 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 CISD2Q8N5K1 135 aaKnown RBP13.62□□□□□ -0.23
SPCS3-204ENST00000513139 MAML1Q92585 1016 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 FATE1Q969F0 183 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 RANBP9Q96S59 729 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 SPATA16Q9BXB7 569 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 RAD18Q9NS91 495 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 KCND1Q9NSA2 647 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 AIPL1Q9NZN9 384 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 NFKBIL1Q9UBC1 381 aaPredicted RBP13.62□□□□□ -0.23
SPCS3-204ENST00000513139 DNAJC16Q9Y2G8 782 aa13.62□□□□□ -0.23
SPCS3-204ENST00000513139 NUP210LQ5VU65 1888 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 A6NL46 340 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 MATN3O15232 486 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 KLHL41O60662 606 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 PRF1P14222 555 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 VCLP18206 1134 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 PER3P56645 1201 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 DSC2Q02487 901 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 CRB2Q5IJ48 1285 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 ZNF648Q5T619 568 aaPredicted RBP13.61□□□□□ -0.23
SPCS3-204ENST00000513139 TIGD7Q6NT04 549 aaPredicted RBP13.61□□□□□ -0.23
SPCS3-204ENST00000513139 ZNF547Q8IVP9 402 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 CARFQ8N187 725 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 ENDOVQ8N8Q3 282 aaKnown RBP13.61□□□□□ -0.23
SPCS3-204ENST00000513139 SLC38A9Q8NBW4 561 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 LPCAT1Q8NF37 534 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 ARRDC2Q8TBH0 407 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 CPT1BQ92523 772 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms