RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NCF4Q15080 339 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 CYB5D1Q6P9G0 228 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 BPHLQ86WA6 291 aaPredicted RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 RAB43Q86YS6 212 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 D2HGDHQ8N465 521 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 CLEC1AQ8NC01 280 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 NEK11Q8NG66 645 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 DNAJB14Q8TBM8 379 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 CHTF18Q8WVB6 975 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 RXFP2Q8WXD0 754 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 UBXN4Q92575 508 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 MTFMTQ96DP5 389 aaKnown RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 CNDP1Q96KN2 507 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 MCCC1Q96RQ3 725 aaPredicted RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 WDR24Q96S15 920 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 SPOCK3Q9BQ16 436 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 TUBB2BQ9BVA1 445 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 RIOK2Q9BVS4 552 aaKnown RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 SLC39A8Q9C0K1 460 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 CXXC4Q9H2H0 198 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 NLRC4Q9NPP4 1024 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 METTL5Q9NRN9 209 aaKnown RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 KLC4Q9NSK0 619 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 PCMTD2Q9NV79 361 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 VPS18Q9P253 973 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 SLC23A2Q9UGH3 650 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 SH3BGRL2Q9UJC5 107 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 PCM1Q15154 2024 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 OR52A4PA6NMU1 304 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 FOXN3O00409 490 aaPredicted RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 CREB3O43889 395 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 ALOX12BO75342 701 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 WISP2O76076 250 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 IPO13O94829 963 aaKnown RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 GYPCP04921 128 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CYP2A6P11509 494 aaPredicted RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 CDH5P33151 784 aaPredicted RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 KRT9P35527 623 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CA7P43166 264 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CLCNKAP51800 687 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 IST1P53990 364 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 SOX8P57073 446 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 AP1S1P61966 158 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CSNK1G2P78368 415 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 PTSQ03393 145 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 SEPT7Q16181 437 aaKnown RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 ZNF789Q5FWF6 425 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 FIGNQ5HY92 759 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 ZNF648Q5T619 568 aaPredicted RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 FBXO38Q6PIJ6 1188 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 XKRXQ6PP77 449 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 FAM180AQ6UWF9 173 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 IGFL2Q6UWQ7 119 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 TRIM48Q8IWZ4 208 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 SYTL1Q8IYJ3 562 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 TTC30BQ8N4P2 665 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 AVL9Q8NBF6 648 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CATSPER1Q8NEC5 780 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 JOSD2Q8TAC2 188 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CPLX3Q8WVH0 158 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 PPM1MQ96MI6 270 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 TAAR6Q96RI8 345 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 SMR3AQ99954 134 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 CINPQ9BW66 212 aaPredicted RBP8.91□□□□□ -0.98
NUP54-211ENST00000512151 RAB33BQ9H082 229 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 OSGEPL1Q9H4B0 414 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 SLC40A1Q9NP59 571 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 ARFGAP3Q9NP61 516 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 P4HTMQ9NXG6 502 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
NUP54-211ENST00000512151 FADS2P1A8MWK0 482 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 LDB2O43679 373 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 FECHP22830 423 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 DNAJA1P31689 397 aaKnown RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 NSUN2Q08J23 767 aaKnown RBP eCLIP8.9□□□□□ -0.98
NUP54-211ENST00000512151 ASIC2Q16515 512 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 PLA2G4EQ3MJ16 856 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 ZNF385CQ66K41 422 aaPredicted RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 E4F1Q66K89 784 aaPredicted RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 B3GNTL1Q67FW5 361 aaPredicted RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 LRRC66Q68CR7 880 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 GFRALQ6UXV0 394 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 NCCRP1Q6ZVX7 275 aaPredicted RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 ENOSF1Q7L5Y1 443 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 ARCQ7LC44 396 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 PPP1R32Q7Z5V6 425 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 PHYKPLQ8IUZ5 450 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 ARHGAP12Q8IWW6 846 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 PGBD5Q8N414 524 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 BCORP1Q8N888 145 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 EXD1Q8NHP7 514 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 SPATA3Q8NHX4 192 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 PIH1D2Q8WWB5 315 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 CENPIQ92674 756 aaPredicted RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 SCRN2Q96FV2 425 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 FER1L6-AS2Q96M78 137 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 GBP5Q96PP8 586 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 TREX2Q9BQ50 279 aaPredicted RBP8.9□□□□□ -0.98
NUP54-211ENST00000512151 STK33Q9BYT3 514 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 ENKD1Q9H0I2 346 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms