RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 LRIG2O94898 1065 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PCSK6P29122 969 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CAPGP40121 348 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CD97P48960 835 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TMBIM6P55061 237 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 HERVK_113P63132 956 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PDCD4Q53EL6 469 aaKnown RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 HECTD3Q5T447 861 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 BTBD8Q5XKL5 378 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CNSTQ6PJW8 725 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PTRH1Q86Y79 214 aaKnown RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 MYO1HQ8N1T3 1032 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TMEM105Q8N8V8 129 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PAPD5Q8NDF8 572 aaKnown RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 DDHD1Q8NEL9 900 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PDZD8Q8NEN9 1154 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 RHEBL1Q8TAI7 183 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 IRF7Q92985 503 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 OMDQ99983 421 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 ERVK-6Q9BXR3 956 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 NUSAP1Q9BXS6 441 aaKnown RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 BRD9Q9H8M2 597 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 NUDT5Q9UKK9 219 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PAIP2BQ9ULR5 123 aaKnown RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 SLC30A1Q9Y6M5 507 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 FAM72CH0Y354 149 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 LEFTY2O00292 366 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 GIPC1O14908 333 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TLR5O60602 858 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 FYNP06241 537 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TPH1P17752 444 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 AVPR2P30518 371 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 GRIA3P42263 894 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 PSMD7P51665 324 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CSHL1Q14406 222 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 GK3PQ14409 553 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 MOGQ16653 247 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 FAM72AQ5TYM5 149 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 FAM72DQ6L9T8 149 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 OGFOD2Q6N063 350 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 RANBP10Q6VN20 620 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 FAM72BQ86X60 149 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CLVS1Q8IUQ0 354 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF786Q8N393 782 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 DHRSXQ8N5I4 330 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 ACVR1CQ8NER5 493 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 DNASE1L2Q92874 299 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 COX4I2Q96KJ9 171 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 BDH2Q9BUT1 245 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 FICDQ9BVA6 458 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 TKTL2Q9H0I9 626 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 SEMA6AQ9H2E6 1030 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 MFSD1Q9H3U5 465 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 SMPD3Q9NY59 655 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-205ENST00000511316 GNPTGQ9UJJ9 305 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 RIMKLBQ9ULI2 386 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 VWA7Q9Y334 891 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 CPQQ9Y646 472 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 A0A0J9YYE9 177 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 C16orf96A6NNT2 1141 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 YJEFN3A6XGL0 299 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 IFRD1O00458 451 aaPredicted RBP12.71□□□□□ -0.38
HMGB2-205ENST00000511316 KATNA1O75449 491 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.38
HMGB2-205ENST00000511316 CKMP06732 381 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 LBPP18428 481 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 GPX3P22352 226 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 ABCG1P45844 678 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 SOX9P48436 509 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 CCT8P50990 548 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 NDST2P52849 883 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 MLLT6P55198 1093 aaPredicted RBP12.71□□□□□ -0.38
HMGB2-205ENST00000511316 PLOD1Q02809 727 aaPredicted RBP12.71□□□□□ -0.38
HMGB2-205ENST00000511316 POU6F1Q14863 301 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 MLF2Q15773 248 aaPredicted RBP12.71□□□□□ -0.38
HMGB2-205ENST00000511316 KIF19Q2TAC6 998 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 GAB4Q2WGN9 574 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 EML3Q32P44 896 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 ZNF678Q5SXM1 525 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 CCNYL2Q5T2Q4 361 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 NEK10Q6ZWH5 1172 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 FRA10AC1Q70Z53 315 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 TRIM74Q86UV6 250 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 TRIM73Q86UV7 250 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 IPMKQ8NFU5 416 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 RNF34Q969K3 372 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 APOL2Q9BQE5 337 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 BCL7BQ9BQE9 202 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 FOXQ1Q9C009 403 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 PCDHAC1Q9H158 963 aa12.71□□□□□ -0.38
HMGB2-205ENST00000511316 SLC25A51Q9H1U9 297 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms