RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PHF19Q5T6S3 580 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CES3Q6UWW8 571 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CREG2Q8IUH2 290 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CLDN19Q8N6F1 224 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CPT1BQ92523 772 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 TBC1D10AQ9BXI6 508 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 STN1Q9H668 368 aaKnown RBP13.72□□□□□ -0.21
DDX41-212ENST00000511040 SARS2Q9NP81 518 aaKnown RBP13.72□□□□□ -0.21
DDX41-212ENST00000511040 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 TMEM9Q9P0T7 183 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 RAXQ9Y2V3 346 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 SAR1BQ9Y6B6 198 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 IGF2RP11717 2491 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 MGAT4DA6NG13 374 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 OR5K4A6NMS3 321 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 TMEM63AO94886 807 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 CPNE6O95741 557 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 VIPP01282 170 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 POLBP06746 335 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 HGFP14210 728 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 NMBRP28336 390 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 NPY2RP49146 381 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 PRAMEP78395 509 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 CFHR1Q03591 330 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 DMPKQ09013 629 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 AGAP9Q5VTM2 703 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 LRRC8BQ6P9F7 803 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 AFTPHQ6ULP2 937 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 ABRAXAS1Q6UWZ7 409 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 ZNF574Q6ZN55 896 aaPredicted RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 NLRP9Q7RTR0 991 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 LDB1Q86U70 411 aaPredicted RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 PIM3Q86V86 326 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 PROSER1Q86XN7 944 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 KLHL7Q8IXQ5 586 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 MPP5Q8N3R9 675 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 LILRA3Q8N6C8 439 aaPredicted RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 OR10G6Q8NH81 332 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 GRK7Q8WTQ7 553 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 HEXDCQ8WVB3 486 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 JPH3Q8WXH2 748 aaPredicted RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 AHCYL2Q96HN2 611 aaKnown RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 ZNF514Q96K75 400 aaPredicted RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 TMEM74Q96NL1 305 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 WWP1Q9H0M0 922 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 POLR1BQ9H9Y6 1135 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 CFAP20Q9Y6A4 193 aaKnown RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.21
DDX41-212ENST00000511040 PRSS21Q9Y6M0 314 aa13.71□□□□□ -0.21
DDX41-212ENST00000511040 IGLV3-16A0A075B6K0 115 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 CCDC187A0A096LP49 1063 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 SRRM3A6NNA2 597 aaPredicted RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 ZW10O43264 779 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 OR1I1O60431 355 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 KCNJ13O60928 360 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 HALP42357 657 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 MAGEA6P43360 314 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 LSSP48449 732 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 PRLHRP49683 370 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 CDK16Q00536 496 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 ACVR1Q04771 509 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 ZFP36L1Q07352 338 aaKnown RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 SEMA3AQ14563 771 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 RPE65Q16518 533 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 SNAP47Q5SQN1 464 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 METRNLQ641Q3 311 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 DUS1LQ6P1R4 473 aaKnown RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 XKR5Q6UX68 686 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 WASH2PQ6VEQ5 465 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 CAND1Q86VP6 1230 aaKnown RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 SLITRK4Q8IW52 837 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 RCBTB1Q8NDN9 531 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 SPDYE1Q8NFV5 336 aaPredicted RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 GPR150Q8NGU9 434 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 OR2L2Q8NH16 312 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 OR4L1Q8NH43 312 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDX41-212ENST00000511040 SH3KBP1Q96B97 665 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 CCDC74BQ96LY2 380 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 IL22Q9GZX6 179 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 WASH6PQ9NQA3 447 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 MARCH4Q9P2E8 410 aaPredicted RBP13.7□□□□□ -0.22
DDX41-212ENST00000511040 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 RIMKLBQ9ULI2 386 aa13.7□□□□□ -0.22
DDX41-212ENST00000511040 IGHV5-10-1A0A0J9YXX1 117 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 TMX2-CTNND1H3BSU7 103 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 AP3B1O00203 1094 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 TLX3O43711 291 aaPredicted RBP13.69□□□□□ -0.22
DDX41-212ENST00000511040 DUX1O43812 170 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 TNFSF15O95150 251 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 TYRP1P17643 537 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 ITGB6P18564 788 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 CCKBRP32239 447 aa13.69□□□□□ -0.22
DDX41-212ENST00000511040 PTGIRP43119 386 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms