RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MAFAQ8NHW3 353 aaPredicted RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CLEC4CQ8WTT0 213 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SCARB1Q8WTV0 552 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RAB40AQ8WXH6 277 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CNOT9Q92600 299 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 GTF3C6Q969F1 213 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 NT5C3BQ969T7 300 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ARSGQ96EG1 525 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PTCD3Q96EY7 689 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 DTD2Q96FN9 168 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 EEF2KMTQ96G04 330 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 BOD1Q96IK1 185 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 USP28Q96RU2 1077 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CDRT15Q96T59 188 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 TBC1D10AQ9BXI6 508 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 THAP2Q9H0W7 228 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PDZD7Q9H5P4 517 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 EVA1AQ9H8M9 152 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CNOT10Q9H9A5 744 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RPF1Q9H9Y2 349 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PARVGQ9HBI0 331 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PNPLA3Q9NST1 481 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 C20orf141Q9NUB4 165 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SPG21Q9NZD8 308 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 IL1RAPL1Q9NZN1 696 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 NCKIPSDQ9NZQ3 722 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 JKAMPQ9P055 326 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 VPS18Q9P253 973 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ABI3Q9P2A4 366 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC17A6Q9P2U8 582 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 STK39Q9UEW8 545 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 BARX2Q9UMQ3 279 aaPredicted RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CDC14AQ9UNH5 594 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 C15orf41Q9Y2V0 281 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 COMMD3-BMI1R4GMX3 469 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PLEKHG2Q9H7P9 1386 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 UBE4BO95155 1302 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 LOC100653049A0A140TA62 436 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 FAM230AA0A1W2PPH8 454 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 TARSL2A2RTX5 802 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 OR6C74A6NCV1 312 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 LRRC53A6NM62 1247 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 E9PLN8 166 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 H0Y8G0 127 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 PSMD9O00233 223 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 PLK4O00444 970 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 MEIS2O14770 477 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 KIAA0391O15091 583 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 NVLO15381 856 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CLDN3O15551 220 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 KRT34O76011 436 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 KAT7O95251 611 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CXCL14O95715 111 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 GPANK1O95872 356 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 TRUB2O95900 331 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 IGHEP01854 428 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 RLN1P04808 185 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 SERPING1P05155 500 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 GALTP07902 379 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 SRPRAP08240 638 aaKnown RBP4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 STAG3L3P0CL85 134 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CTPS1P17812 591 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CD72P21854 359 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 ALDH1B1P30837 517 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 MTNR1AP48039 350 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 ARSFP54793 590 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 GALCP54803 685 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 FOXL2P58012 376 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 PTENP60484 403 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 ACTR3P61158 418 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CXADRP78310 365 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 OCA2Q04671 838 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 RBPJQ06330 500 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 TCF15Q12870 199 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 PDZK1IP1Q13113 114 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 LPIN1Q14693 890 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 UBXN2BQ14CS0 331 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 RUNDC3AQ59EK9 446 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 PRAMEF20Q5VT98 475 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 PRAMEF8Q5VWM4 474 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 AFMIDQ63HM1 303 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 BRAT1Q6PJG6 821 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 FOXR2Q6PJQ5 311 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CORO6Q6QEF8 472 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 C17orf99Q6UX52 265 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 KIF6Q6ZMV9 814 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF572Q7Z3I7 529 aaPredicted RBP4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 ADAMTSL2Q86TH1 951 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 TADA2BQ86TJ2 420 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 CCDC83Q8IWF9 413 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC7A5P1Q8MH63 180 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 MCUQ8NE86 351 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC24A4Q8NFF2 622 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 STEAP2Q8NFT2 490 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 TSPAN14Q8NG11 270 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 DNAJB14Q8TBM8 379 aa4.26□□□□□ -1.73
SMARCA5-202ENST00000508573 LPGAT1Q92604 370 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms