RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TAC4Q86UU9 113 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 STK32CQ86UX6 486 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 IGFN1Q86VF2 1251 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 IFNEQ86WN2 208 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZFAND4Q86XD8 727 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 HIPK1Q86Z02 1210 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 LACC1Q8IV20 430 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARHGAP12Q8IWW6 846 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM9CQ8IZT9 166 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SPARTQ8N0X7 666 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 UMODL1-AS1Q8N2C9 162 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM130Q8N3G9 435 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZCCHC7Q8N3Z6 543 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CARNMT1Q8N4J0 409 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 RTL3Q8N8U3 475 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 NETO2Q8NC67 525 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GLB1L3Q8NCI6 653 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 BPIFB6Q8NFQ5 453 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ABHD11Q8NFV4 315 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR5K1Q8NHB7 308 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 DNAJB14Q8TBM8 379 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PHF10Q8WUB8 498 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 RORBQ92753 470 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC35B4Q969S0 331 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMBIM1Q969X1 311 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 KIAA1191Q96A73 305 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SENP8Q96LD8 212 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 C1orf74Q96LT6 269 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF599Q96NL3 588 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MUS81Q96NY9 551 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SERPINB11Q96P15 392 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PGLYRP2Q96PD5 576 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALPK1Q96QP1 1244 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SEPHS2Q99611 448 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMOQ99835 787 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 FUNDC2Q9BWH2 189 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC39A8Q9C0K1 460 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 LHPPQ9H008 270 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 NACA2Q9H009 215 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MUC3BQ9H195 1237 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CRISPLD1Q9H336 500 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMOC2Q9H3U7 446 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 NXF3Q9H4D5 531 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GORASP2Q9H8Y8 452 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SP140LQ9H930 580 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SP110Q9HB58 689 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM165Q9HC07 324 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CPNE5Q9HCH3 593 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 FBRSL1Q9HCM7 1045 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CSNK1G1Q9HCP0 422 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP13A1Q9HD20 1204 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CRTAC1Q9NQ79 661 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 FBXO8Q9NRD0 319 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ENAMQ9NRM1 1142 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 HEBP1Q9NRV9 189 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CATSPERZQ9NTU4 200 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM118AQ9NWS6 357 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 OSER1Q9NX31 292 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MTRRQ9UBK8 725 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SFMBT1Q9UHJ3 866 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SCAF8Q9UPN6 1271 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ERVW-1Q9UQF0 538 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP11BQ9Y2G3 1177 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 NAALAD2Q9Y3Q0 740 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TNPO3Q9Y5L0 923 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ST14Q9Y5Y6 855 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 COMMD10Q9Y6G5 202 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MGAMO43451 1857 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 BRWD3Q6RI45 1802 aa4.9□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF236Q9UL36 1845 aa4.9□□□□□ -1.62
HMGB3P16-201ENST00000508037 WDR90Q96KV7 1748 aa4.9□□□□□ -1.62
HMGB3P16-201ENST00000508037 LCHNA4D1U4 455 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 HHLA1C9JL84 531 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 J3QRK9 145 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 M0QX08 132 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FZD9O00144 591 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TAF4O00268 1085 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC16A6O15403 523 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 AQP9O43315 295 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 HCRTO43612 131 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 KLK8O60259 260 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPR32O75388 356 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 VPS26AO75436 327 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAGE1O75459 146 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 BEST1O76090 585 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RHOBTB1O94844 696 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 MT-CO1P00395 513 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 EGFRP00533 1210 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 C1RP00736 705 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CST1P01037 141 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 IGLV3-25P01717 112 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CHRNA1P02708 482 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC4A1P02730 911 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 S100BP04271 92 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 MMP3P08254 477 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPS17P08708 135 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ITGAMP11215 1152 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms