RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 QSOX1O00391 747 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 TPP1O14773 563 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 PHGDHO43175 533 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 KRT37O76014 449 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 ALDOAP04075 364 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 GPR89BP0CG08 455 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 PBLDP30039 288 aaPredicted RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 GMPRP36959 345 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 MAGEA12P43365 314 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 GNPDA1P46926 289 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 CSRP3P50461 194 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 CLCN7P51798 805 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 AFF3P51826 1226 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 NXPH1P58417 271 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 SRP54P61011 504 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 POU4F1Q01851 419 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 BNC1Q01954 994 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 ILF2Q12905 390 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 USP10Q14694 798 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 ZKSCAN8Q15776 578 aaPredicted RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 ZNF658BQ4V348 819 aaPredicted RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 ZC3H14Q6PJT7 736 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 XKR5Q6UX68 686 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 DCP2Q8IU60 420 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 CD200R1Q8TD46 325 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 KCNJ9Q92806 393 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 ATOH1Q92858 354 aaPredicted RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 ISL2Q96A47 359 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 LINC00615Q96LM1 132 aaPredicted RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 TCEAL2Q9H3H9 227 aaPredicted RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 RMI1Q9H9A7 625 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 CARS2Q9HA77 564 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 SARS2Q9NP81 518 aaKnown RBP13.96□□□□□ -0.17
RNF4-208ENST00000507247 SNX15Q9NRS6 342 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 GULP1Q9UBP9 304 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 SLC23A2Q9UGH3 650 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 SUSD2Q9UGT4 822 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 ZNHIT2Q9UHR6 403 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 PLEKHM1Q9Y4G2 1056 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 MYO15AQ9UKN7 3530 aa13.96□□□□□ -0.17
RNF4-208ENST00000507247 USP34Q70CQ2 3546 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 A0A1W2PPM1 405 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 PRR5-ARHGAP8B1AHC4 643 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 E5RI56 91 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 KMOO15229 486 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 VPS26AO75436 327 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 RFPL1O75677 317 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 POP7O75817 140 aaKnown RBP13.95□□□□□ -0.18
RNF4-208ENST00000507247 EPN2O95208 641 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 WISP3O95389 354 aaPredicted RBP13.95□□□□□ -0.18
RNF4-208ENST00000507247 FTH1P02794 183 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 GNSP15586 552 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 CHRM3P20309 590 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 CD9P21926 228 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 CCR7P32248 378 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 SERPINB8P50452 374 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 ZNF542PQ5EBM4 170 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 TNFAIP8L3Q5GJ75 292 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 TMEM207Q6UWW9 146 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 TIFABQ6ZNK6 161 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 CROCCP2Q86T23 111 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 PARGQ86W56 976 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 GALNT13Q8IUC8 556 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 HID1Q8IV36 788 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 OXR1Q8N573 874 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 LILRA3Q8N6C8 439 aaPredicted RBP13.95□□□□□ -0.18
RNF4-208ENST00000507247 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 ZNF514Q96K75 400 aaPredicted RBP13.95□□□□□ -0.18
RNF4-208ENST00000507247 PANX3Q96QZ0 392 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 OR2M4Q96R27 311 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 CCM2Q9BSQ5 444 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 LATS2Q9NRM7 1088 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 TAS2R13Q9NYV9 303 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 ST14Q9Y5Y6 855 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 DGKBQ9Y6T7 804 aa13.95□□□□□ -0.18
RNF4-208ENST00000507247 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 RGS16O15492 202 aaPredicted RBP13.94□□□□□ -0.18
RNF4-208ENST00000507247 MAGEC1O60732 1142 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 ACP5P13686 325 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 STMN1P16949 149 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 KRT15P19012 456 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 AOAHP28039 575 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 CTSKP43235 329 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 HK3P52790 923 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 C21orf59P57076 290 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 RAB10P61026 200 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 PPARDQ03181 441 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 NFE2L1Q14494 772 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 TEAD4Q15561 434 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 KIF19Q2TAC6 998 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 RALGAPA1Q6GYQ0 2036 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 FAM83HQ6ZRV2 1179 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms