RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 KRT35Q92764 455 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 FCRL4Q96PJ5 515 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 HEMGNQ9BXL5 484 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 STARD5Q9NSY2 213 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 SIDT1Q9NXL6 827 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 SCHIP1Q9P0W5 487 aaPredicted RBP14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 KLHL3Q9UH77 587 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 TMPRSS11EQ9UL52 423 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 SPTA1P02549 2419 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 MGAQ8IWI9 3026 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 MACROD2A1Z1Q3 448 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 MGAT4DA6NG13 374 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 CFAP99D6REC4 459 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 RASSF9O75901 435 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 PRAMEF1O95521 474 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 LIFP15018 202 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 BRAFP15056 766 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 RPL10P27635 214 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 NDUFS1P28331 727 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 AKT1P31749 480 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 CHRNA4P43681 627 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 CCR10P46092 362 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 EIF3EP60228 445 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 OTUD4Q01804 1114 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 SRSF6Q13247 344 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 LLGL1Q15334 1064 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 SEPT7Q16181 437 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 KHDC1Q4VXA5 237 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 DARS2Q6PI48 645 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 TMEM220Q6QAJ8 160 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 UBL4BQ8N7F7 174 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 RASGEF1AQ8N9B8 481 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 EXD3Q8N9H8 876 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 JPH3Q8WXH2 748 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 KLHL6Q8WZ60 621 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 PMEPA1Q969W9 287 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 DCUN1D1Q96GG9 259 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 LINC00615Q96LM1 132 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 SPATA13Q96N96 652 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 TGM7Q96PF1 710 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 GOLPH3Q9H4A6 298 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 SEMA5BQ9P283 1151 aa14.15□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF462Q96JM2 2506 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 SLC28A2O43868 658 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 DLGAP3O95886 979 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 RECKO95980 971 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 GSTM1P09488 218 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 FGF5P12034 268 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 TYRP1P17643 537 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 MARCKSL1P49006 195 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ZNF75DP51815 510 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 VAV2P52735 878 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 GSTM4Q03013 218 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ACY1Q03154 408 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 FOXM1Q08050 763 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 NFATC3Q12968 1075 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 GPR18Q14330 331 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 BCL7AQ4VC05 210 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ANKRD20A2Q5SQ80 823 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ANKRD20A1Q5TYW2 823 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 CACHD1Q5VU97 1274 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ANKRD20A3Q5VUR7 823 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 METRNLQ641Q3 311 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ATG14Q6ZNE5 492 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 SEC14L1Q92503 715 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 CCM2Q9BSQ5 444 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 FICDQ9BVA6 458 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 SLC25A18Q9H1K4 315 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ASB8Q9H765 288 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 VPS37BQ9H9H4 285 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 ARNT2Q9HBZ2 717 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 PDE7BQ9NP56 450 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 OGFRQ9NZT2 677 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 KCND3Q9UK17 655 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 PCDHB3Q9Y5E6 796 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 HEBP2Q9Y5Z4 205 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 SLC30A1Q9Y6M5 507 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 COLEC10Q9Y6Z7 277 aa14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 HELZ2Q9BYK8 2649 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-203ENST00000507004 OR52A4PA6NMU1 304 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 MATN2O00339 956 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 KCNN4O15554 427 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 PSMD3O43242 534 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A9O60656 530 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 SRP72O76094 671 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 AGTP01019 485 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 CCNYL3P0C7X3 344 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A6P19224 532 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 WT1P19544 449 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 ITGALP20701 1170 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A1P22309 533 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A4P22310 534 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 ADRA1AP35348 466 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 STAT5AP42229 794 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 DRG2P55039 364 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 GFERP55789 205 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms