RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 CCDC68Q9H2F9 335 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 TAS2R13Q9NYV9 303 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 SENP1Q9P0U3 644 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 EIF2B4Q9UI10 523 aaKnown RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 DHRS7Q9Y394 339 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 OR1A2Q9Y585 309 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ACTL7BQ9Y614 415 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 PCNX2A6NKB5 2137 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 COL5A1P20908 1838 aaPredicted RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 LAMA1P25391 3075 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SPTY2D1-AS1A0A0U1RR47 76 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 A0A1W2PPM1 405 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 PRSS38A1L453 326 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 FAM86C2PA6NEL3 165 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TMEM202A6NGA9 273 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SMIM23A6NLE4 172 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 MEI4A8MW99 385 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 EIF3FO00303 357 aaPredicted RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 KPNA5O15131 536 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 KMOO15229 486 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 MAGEC1O60732 1142 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 KCNJ13O60928 360 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 NIPSNAP2O75323 286 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 MTX2O75431 263 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 VPS26AO75436 327 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 RHOBTB1O94844 696 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SLC34A2O95436 690 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 FTH1P02794 183 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 FUCA1P04066 466 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 WNT1P04628 370 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 MPOP05164 745 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SLC35E2BP0CK96 405 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 COL6A2P12110 1019 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 STMN1P16949 149 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 KRT15P19012 456 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 AOAHP28039 575 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CD38P28907 300 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CRABP2P29373 138 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TYK2P29597 1187 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CCNFP41002 786 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 DPP6P42658 865 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ABCG1P45844 678 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SERPINB8P50452 374 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CTSCP53634 463 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TAS2R39P59534 338 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 RAB10P61026 200 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 DMPKQ09013 629 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 BMPR2Q13873 1038 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 GTF2H3Q13889 308 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 PDE1CQ14123 709 aaPredicted RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 USP10Q14694 798 aaKnown RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 PYCR3Q53H96 274 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TTMPQ5BVD1 217 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ZNF648Q5T619 568 aaPredicted RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 PTRHD1Q6GMV3 140 aaKnown RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 TMEM220Q6QAJ8 160 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 KDM7AQ6ZMT4 941 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 Q6ZSR6 202 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TRIM74Q86UV6 250 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 LRRTM4Q86VH4 590 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 EXOC3L1Q86VI1 746 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 LCA5Q86VQ0 697 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ZNF547Q8IVP9 402 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SLC22A18ASQ8N1D0 253 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 OXR1Q8N573 874 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 DEFB119Q8N690 84 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 OR56A4Q8NGH8 313 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CD200R1Q8TD46 325 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SNX19Q92543 992 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ARL8AQ96BM9 186 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ALKBH8Q96BT7 664 aaKnown RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 SGF29Q96ES7 293 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 KLHDC7BQ96G42 594 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ATXN7L3BQ96GX2 97 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 PDLIM5Q96HC4 596 aaKnown RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 ATP6V1G3Q96LB4 118 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 UBXN10Q96LJ8 280 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 WDR92Q96MX6 357 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SLC6A18Q96N87 628 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 NDNQ99608 321 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 MYOCQ99972 504 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CCM2Q9BSQ5 444 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TSSK1BQ9BXA7 367 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 C1QTNF1Q9BXJ1 281 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 STMN4Q9H169 189 aaPredicted RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 SYTL2Q9HCH5 934 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TM9SF3Q9HD45 589 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SSU72Q9NP77 194 aaKnown RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 SNX15Q9NRS6 342 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SPATS2LQ9NUQ6 558 aaKnown RBP7.09□□□□□ -1.27
NUP54-204ENST00000506098 MKS1Q9NXB0 559 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 GALPQ9UBC7 116 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 GULP1Q9UBP9 304 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 SLC39A10Q9ULF5 831 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 CA5BQ9Y2D0 317 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 ANKRD6Q9Y2G4 727 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 TMEM98Q9Y2Y6 226 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms