RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 PCDH18Q9HCL0 1135 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 TRIM39Q9HCM9 518 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 FGF21Q9NSA1 209 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 RBM22Q9NW64 420 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPN20-216ENST00000506080 EPHA6Q9UF33 1036 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 SLC5A6Q9Y289 635 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 PCDHGB7Q9Y5F8 929 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 HIVEP3Q5T1R4 2406 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 CRYBG3Q68DQ2 2970 aa9.01□□□□□ -0.97
PTPN20-216ENST00000506080 CHUKO15111 745 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 MFSD11O43934 449 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 CPNE3O75131 537 aaKnown RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 CEACAM4O75871 244 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 CBX6O95503 412 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 FTLP02792 175 aaPredicted RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 HLA-DQB2P05538 268 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ATP1A3P13637 1013 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 LPOP22079 712 aaPredicted RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 CA4P22748 312 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ELAVL4P26378 380 aaKnown RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 PCK1P35558 622 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ZNF165P49910 485 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ACY1Q03154 408 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 UBXN1Q04323 297 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 GPS2Q13227 327 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 GPR19Q15760 415 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 BOLA3Q53S33 107 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ALG1LQ6GMV1 187 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 LCN10Q6JVE6 187 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 IRF2BP2Q7Z5L9 587 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 TMEM126BQ8IUX1 230 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 CISD2Q8N5K1 135 aaKnown RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 GPR26Q8NDV2 337 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ARRDC2Q8TBH0 407 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 UBXN4Q92575 508 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 PNPLA2Q96AD5 504 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 EID2BQ96D98 161 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ZNF514Q96K75 400 aaPredicted RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 FCRL4Q96PJ5 515 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 TIMM29Q9BSF4 260 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 SYT11Q9BT88 431 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 CHST8Q9H2A9 424 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 WASH6PQ9NQA3 447 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 ASF1BQ9NVP2 202 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 FANCLQ9NW38 375 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
PTPN20-216ENST00000506080 SNX7Q9UNH6 387 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 WDR37Q9Y2I8 494 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 CENPEQ02224 2701 aa9□□□□□ -0.97
PTPN20-216ENST00000506080 RGSL1A5PLK6 1076 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 LGALS16A8MUM7 142 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 F5H423 210 aaPredicted RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 MATN3O15232 486 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 DDX3YO15523 660 aaKnown RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 SCRG1O75711 98 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 CDK14O94921 469 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 CD48P09326 243 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 CCDC172P0C7W6 258 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 PIRTP0C851 137 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 IDSP22304 550 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 CD86P42081 329 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 ITGA1P56199 1179 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 RPL26P61254 145 aaKnown RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 GALNT2Q10471 571 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 GALNT3Q14435 633 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 KRT81Q14533 505 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 KYNUQ16719 465 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 PLEKHN1Q494U1 663 aaPredicted RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 KHDC1Q4VXA5 237 aaKnown RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 FAM182AQ5T1J6 154 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 PRAMEF17Q5VTA0 474 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 IZUMO3Q5VZ72 239 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 TIGD7Q6NT04 549 aaPredicted RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 PPP1R2P3Q6NXS1 205 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 ABRAXAS1Q6UWZ7 409 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 LRRC49Q8IUZ0 686 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 ZNF547Q8IVP9 402 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 RBM12BQ8IXT5 1001 aaKnown RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 ENDOVQ8N8Q3 282 aaKnown RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 SLC38A9Q8NBW4 561 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 GPR150Q8NGU9 434 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 ADAMTS17Q8TE56 1095 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 MAML1Q92585 1016 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 GLYATL1Q969I3 302 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 RANBP9Q96S59 729 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 RAB33BQ9H082 229 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 NUP62CLQ9H1M0 184 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 GPR83Q9NYM4 423 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 SEMA5BQ9P283 1151 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 RPL26L1Q9UNX3 145 aaKnown RBP8.99□□□□□ -0.97
PTPN20-216ENST00000506080 SHOC2Q9UQ13 582 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 SCINQ9Y6U3 715 aa8.99□□□□□ -0.97
PTPN20-216ENST00000506080 LRBAP50851 2863 aa8.98□□□□□ -0.97
PTPN20-216ENST00000506080 DOPEY1Q5JWR5 2465 aa8.98□□□□□ -0.97
PTPN20-216ENST00000506080 SSU72P8A0A1W2PR75 194 aa8.98□□□□□ -0.97
PTPN20-216ENST00000506080 UBA6A0AVT1 1052 aaPredicted RBP8.98□□□□□ -0.97
PTPN20-216ENST00000506080 ANKUB1A6NFN9 424 aa8.98□□□□□ -0.97
PTPN20-216ENST00000506080 ANKRD66B4E2M5 251 aa8.98□□□□□ -0.97
PTPN20-216ENST00000506080 GPR89AB7ZAQ6 455 aa8.98□□□□□ -0.97
PTPN20-216ENST00000506080 JCHAINP01591 159 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms