RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PDPK2PQ6A1A2 396 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 BZW1Q7L1Q6 419 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 TMC3Q7Z5M5 1100 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 ADGRG6Q86SQ4 1221 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 PLXDC1Q8IUK5 500 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 SLC34A3Q8N130 599 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 TFB1MQ8WVM0 346 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 TCTN2Q96GX1 697 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 PLEKHG4BQ96PX9 1271 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 TRIM55Q9BYV6 548 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 TSPY26PQ9H489 355 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 EPB41L1Q9H4G0 881 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 SIDT1Q9NXL6 827 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 SAE1Q9UBE0 346 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 PCDHGA9Q9Y5G4 932 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 PCDHGA6Q9Y5G7 932 aa15.74■□□□□ 0.11
PDLIM7-213ENST00000505074 GPR89AB7ZAQ6 455 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 CDK14O94921 469 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 GPR89BP0CG08 455 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 ZNF7P17097 686 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 BPIP17213 487 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 TYRP1P17643 537 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 COMTP21964 271 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 PTPN3P26045 913 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 SKOR2Q2VWA4 1001 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 TRAPPC5Q8IUR0 188 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 RASGRP3Q8IV61 690 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 CNGA4Q8IV77 575 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 CCDC50Q8IVM0 306 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 SEC14L1Q92503 715 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 HAUS1Q96CS2 278 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 RNF31Q96EP0 1072 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 C5orf34Q96MH7 638 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 TTC25Q96NG3 672 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 SRPK1Q96SB4 655 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 SLAMF7Q9NQ25 335 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 KLHL8Q9P2G9 620 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 TRIM10Q9UDY6 481 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 SPO11Q9Y5K1 396 aa15.73■□□□□ 0.11
PDLIM7-213ENST00000505074 LILRA5A6NI73 299 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 AKR1B15C9JRZ8 316 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 AURKAO14965 403 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 VEGFDO43915 354 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 CST8O60676 142 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 RASSF9O75901 435 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 UBXN7O94888 489 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 NDUFA10O95299 355 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 ANKRD34CP0C6C1 535 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 VCLP18206 1134 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 NFKB1P19838 968 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 RPL10P27635 214 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 NR2C2P49116 596 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 GFERP55789 205 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 UBE2IP63279 158 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 DNASE1L3Q13609 305 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 NAA30Q147X3 362 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 SLC14A2Q15849 920 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 PRR30Q53SZ7 412 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 ZC3H18Q86VM9 953 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 SLC25A41Q8N5S1 370 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 TTC13Q8NBP0 860 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 THAP4Q8WY91 577 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 CXorf40BQ96DE9 158 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 TEKT5Q96M29 485 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 TGM7Q96PF1 710 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 MLXIPLQ9NP71 852 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 ACSS2Q9NR19 701 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 SCHIP1Q9P0W5 487 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 NFKBIL1Q9UBC1 381 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 SLC23A2Q9UGH3 650 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 FAM153AQ9UHL3 310 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 PADI1Q9ULC6 663 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 SLC5A6Q9Y289 635 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 ADGRG1Q9Y653 693 aa15.72■□□□□ 0.11
PDLIM7-213ENST00000505074 PSTPIP1O43586 416 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 MT-ND3P03897 115 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 PECAM1P16284 738 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 IDSP22304 550 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 CDKN2BP42772 138 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 LEPRP48357 1165 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 SEPHS1P49903 392 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 CLCNKAP51800 687 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 DRG2P55039 364 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 IL11RAQ14626 422 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 PRKD1Q15139 912 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 NOMO1Q15155 1222 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 ATP13A5Q4VNC0 1218 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 SPOCD1Q6ZMY3 1216 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 TMEM26Q6ZUK4 368 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 IPMKQ8NFU5 416 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 BLOC1S5Q8TDH9 187 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 P3H4Q92791 437 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 OR6C1Q96RD1 312 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 TIMM29Q9BSF4 260 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 GOLPH3Q9H4A6 298 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 INTUQ9ULD6 942 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 ZNF451Q9Y4E5 1061 aa15.71■□□□□ 0.11
PDLIM7-213ENST00000505074 MN1Q10571 1320 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-213ENST00000505074 OR52A4PA6NMU1 304 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms