RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SMYD2Q9NRG4 433 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ABCF3Q9NUQ8 709 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 DDX43Q9NXZ2 648 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC39A1Q9NY26 324 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 AATFQ9NY61 560 aaKnown RBP eCLIP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MTRRQ9UBK8 725 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC9A2Q9UBY0 812 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TUBGCP4Q9UGJ1 667 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 LAMP5Q9UJQ1 280 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CDC23Q9UJX2 597 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNPY2Q9Y2B0 182 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF510Q9Y2H8 683 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MAGED1Q9Y5V3 778 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 DGKBQ9Y6T7 804 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SOGA1O94964 1423 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 A0A087WUV0 522 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 LOC100653049A0A140TA62 436 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 A0A1B0GVC2 190 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TYW5A2RUC4 315 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 LILRA5A6NI73 299 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC69A6NI79 296 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR6C65A6NJZ3 312 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 H0Y626 953 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 J3KRW8 73 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHUKO15111 745 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC7A4O43246 635 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZBTB43O43298 467 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZIC3O60481 467 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DKC1O60832 514 aaKnown RBP eCLIP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 RFPL2O75678 378 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 KRT34O76011 436 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TOMM70O94826 608 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLU7O95391 586 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DDX58O95786 925 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 AGR2O95994 175 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SRCP12931 536 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PDGFRAP16234 1089 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF3P17036 446 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 MUTP22033 750 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 JAK1P23458 1154 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CTNNA2P26232 953 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 RPL9P32969 192 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TTKP33981 857 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PTPN9P43378 593 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 IFNAR2P48551 515 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 FMO5P49326 533 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 AMPHP49418 695 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACADVLP49748 655 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCNHP51946 323 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 MAP3K7CLP57077 242 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DSTNP60981 165 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 POLR2FP61218 127 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SSTP61278 116 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DMPKQ09013 629 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 HSPA14Q0VDF9 509 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 AP1B1Q10567 949 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SREBF2Q12772 1141 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 BTG3Q14201 252 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 LPAL2Q16609 132 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 IMMTQ16891 758 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 FUT11Q495W5 492 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 WLSQ5T9L3 541 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TWF2Q6IBS0 349 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 GALNT17Q6IS24 598 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 XRRA1Q6P2D8 792 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 KLC3Q6P597 504 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 GJB7Q6PEY0 223 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CLEC17AQ6ZS10 378 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 NCCRP1Q6ZVX7 275 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 STXBP4Q6ZWJ1 553 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 RRAGAQ7L523 313 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SYT13Q7L8C5 426 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 FASTKD5Q7L8L6 764 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 KRT74Q7RTS7 529 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PPP1R42Q7Z4L9 355 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TBC1D1Q86TI0 1168 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 NFE4Q86UQ8 179 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHD1LQ86WJ1 897 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 GRAMD2AQ8IUY3 354 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC50Q8IVM0 306 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 WDR63Q8IWG1 891 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 C12orf56Q8IXR9 622 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TBC1D21Q8IYX1 336 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 MAML2Q8IZL2 1156 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNBD1Q8NA66 436 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SETD9Q8NE22 299 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DNAAF1Q8NEP3 725 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR8K1Q8NGG5 319 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 GDAP1Q8TB36 358 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM170AQ8WVE7 144 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SEPT8Q92599 483 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 RUBCNQ92622 972 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATP6V0A1Q93050 837 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM149B1Q96BN6 582 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SGK3Q96BR1 496 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DHX58Q96C10 678 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 KIF1BPQ96EK5 621 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 LTV1Q96GA3 475 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ANKRD27Q96NW4 1050 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PSKH2Q96QS6 385 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms