RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 DSELQ8IZU8 1212 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SVOPQ8N4V2 548 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 COMMD1Q8N668 190 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 EEF1AKMT1Q8WVE0 214 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FBXW5Q969U6 566 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 KCNC2Q96PR1 638 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FUZQ9BT04 418 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 DGCR6LQ9BY27 220 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 METTL9Q9H1A3 318 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF69Q9UC07 566 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 POLLQ9UGP5 575 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 USP18Q9UMW8 372 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MTMR6Q9Y217 621 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SRPRBQ9Y5M8 271 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AGLP35573 1532 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ATP5J2-PTCD1G3V325 749 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CLDN3O15551 220 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 OR10H2O60403 315 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TLR5O60602 858 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PTCD1O75127 700 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PROZP22891 400 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TBXAS1P24557 533 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TPI1P60174 286 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 POU6F1Q14863 301 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CMPK2Q5EBM0 449 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 RBM48Q5RL73 367 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PIK3R6Q5UE93 754 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF720Q7Z2F6 126 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 DENND1CQ8IV53 801 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CDAN1Q8IWY9 1227 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 COQ8AQ8NI60 647 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PPP4R1Q8TF05 950 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 DEDD2Q8WXF8 326 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 AZIN2Q96A70 460 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TADA1Q96BN2 335 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 C7orf26Q96N11 449 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF700Q9H0M5 742 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 LRMDAQ9H2I8 198 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PDGFCQ9NRA1 345 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 SLC2A9Q9NRM0 540 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 RNF14Q9UBS8 474 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CHTOPQ9Y3Y2 248 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CLUHO75153 1309 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 AFF2P51816 1311 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 RGS12O14924 1447 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PZPP20742 1482 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 A0A1B0GWJ7 208 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 OR10H3O60404 316 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CLN5O75503 358 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 GATBO75879 557 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CEBPBP17676 345 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TAGLN2P37802 199 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 NAA10P41227 235 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ABCE1P61221 599 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 OCRLQ01968 901 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CHRNB3Q05901 458 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF155Q12901 538 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PIGHQ14442 188 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 BCL2A1Q16548 175 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 OR52E8Q6IFG1 317 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CEP76Q8TAP6 659 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 SPATA20Q8TB22 786 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 HM13Q8TCT9 377 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CELF1Q92879 486 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 KIAA1191Q96A73 305 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TSPAN17Q96FV3 270 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 FAM89AQ96GI7 184 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 SERAC1Q96JX3 654 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ACBD6Q9BR61 282 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 TMBIM4Q9HC24 238 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 MBIPQ9NS73 344 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 EMILIN3Q9NT22 766 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 GPRC5BQ9NZH0 403 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PLA2G4CQ9UP65 541 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CLCA2Q9UQC9 943 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PCDHGA9Q9Y5G4 932 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 AP4B1Q9Y6B7 739 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 AOX1Q06278 1338 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 F5H0A9 414 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 H3BSA7 217 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 SLC22A2O15244 555 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 OGTO15294 1046 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 BNIP3LO60238 219 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 AKAP3O75969 853 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 UNC5CO95185 931 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CNIH1O95406 144 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CBSLP0DN79 551 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CBR1P16152 277 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 RAB6AP20340 208 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CRABP1P29762 137 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CBSP35520 551 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ARRB1P49407 418 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CDK9P50750 372 aaKnown RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 BMXP51813 675 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 GTF2IP78347 998 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CLDN10P78369 228 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 CACNB1Q02641 598 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 PUM1Q14671 1186 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLCN3-204ENST00000504131 ATP6AP1Q15904 470 aa6.19□□□□□ -1.42
CLCN3-204ENST00000504131 C4orf17Q53FE4 359 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms