RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PYCR3Q53H96 274 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 ZC3H14Q6PJT7 736 aaKnown RBP20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 TIFABQ6ZNK6 161 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 RD3Q7Z3Z2 195 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 C11orf96Q7Z7L8 435 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 PIM3Q86V86 326 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SPATS2Q86XZ4 545 aaKnown RBP20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SYT12Q8IV01 421 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SPNS2Q8IVW8 549 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SKA1Q96BD8 255 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 PGM2Q96G03 612 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 CCM2Q9BSQ5 444 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 ACBD3Q9H3P7 528 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 TMBIM4Q9HC24 238 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SNX15Q9NRS6 342 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 SUSD2Q9UGT4 822 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 FANCMQ8IYD8 2048 aa20.08■□□□□ 0.8
CDC42SE2-206ENST00000503291 PRR5-ARHGAP8B1AHC4 643 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 TPP1O14773 563 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 KMOO15229 486 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 RFPL1O75677 317 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 POP7O75817 140 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 CD9P21926 228 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 CCR7P32248 378 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SKIV2L2P42285 1042 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 GNPDA1P46926 289 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 CLCN7P51798 805 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 RAB10P61026 200 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 EIF2B5Q13144 721 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 ZNF460Q14592 562 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 ALG11Q2TAA5 492 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 GALNT13Q8IUC8 556 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 TSPAN17Q96FV3 270 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 LINC00615Q96LM1 132 aaPredicted RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SLC30A3Q99726 388 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 PRRX2Q99811 253 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 TSSK1BQ9BXA7 367 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 CARS2Q9HA77 564 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 TM7SF3Q9NS93 570 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SPATS2LQ9NUQ6 558 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 GPSM3Q9Y4H4 160 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SCAMP1O15126 338 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 PHGDHO43175 533 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 MT-ND3P03897 115 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SERPINB8P50452 374 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 C21orf59P57076 290 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 NXPH1P58417 271 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 TCF15Q12870 199 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 TEAD4Q15561 434 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 ZKSCAN8Q15776 578 aaPredicted RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 ZNF542PQ5EBM4 170 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 UGT3A1Q6NUS8 523 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 NAPRTQ6XQN6 538 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 CHST15Q7LFX5 561 aaPredicted RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 OTOAQ7RTW8 1153 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 HID1Q8IV36 788 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SIDT2Q8NBJ9 832 aaKnown RBP20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 ISL2Q96A47 359 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 LATS2Q9NRM7 1088 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 GULP1Q9UBP9 304 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 SLC23A2Q9UGH3 650 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 DHRS7Q9Y394 339 aa20.07■□□□□ 0.8
CDC42SE2-206ENST00000503291 PBLDP30039 288 aaPredicted RBP20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 PPARDQ03181 441 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 PDAP1Q13442 181 aaKnown RBP20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 PLA2G4EQ3MJ16 856 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 PEAR1Q5VY43 1037 aaPredicted RBP20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 RAPH1Q70E73 1250 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 PARGQ86W56 976 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 GIMAP7Q8NHV1 300 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 CD200R1Q8TD46 325 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 ELMO1Q92556 727 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 SH3GL2Q99962 352 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 KLF15Q9UIH9 416 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 TRMT6Q9UJA5 497 aaKnown RBP20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 DNMT3AQ9Y6K1 912 aaPredicted RBP20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 DGKBQ9Y6T7 804 aa20.06■□□□□ 0.8
CDC42SE2-206ENST00000503291 A0A1B0GVT2 93 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 DLL1O00548 723 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 OPA1O60313 960 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 CRABP2P29373 138 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 CSRP3P50461 194 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 HK3P52790 923 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 TNFAIP8L3Q5GJ75 292 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 PPM1JQ5JR12 505 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 PAQR3Q6TCH7 311 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 TRABD2AQ86V40 505 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 AMZ2Q86W34 360 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 PRSS33Q8NF86 280 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 CAAP1Q9H8G2 361 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 GPAMQ9HCL2 828 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 FAM8A1Q9UBU6 413 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 ANKRD6Q9Y2G4 727 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 CACNA1HO95180 2353 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 MGAT4DA6NG13 374 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 GOLGA8RI6L899 631 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 TNFP01375 233 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 C2P06681 752 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 AOAHP28039 575 aa20.05■□□□□ 0.8
CDC42SE2-206ENST00000503291 MAGEA12P43365 314 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms