RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CDKN1CP49918 316 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 HADHBP55084 474 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 RPS14P62263 151 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 CDKL1Q00532 357 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 WASHC5Q12768 1159 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ALCAMQ13740 583 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PTK6Q13882 451 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 SF3B4Q15427 424 aaKnown RBP eCLIP4.48□□□□□ -1.691e-7■■■■□ 23.7
MATR3-202ENST00000502422 ZNF829Q3KNS6 432 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 FAAH2Q6GMR7 532 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ALG1LQ6GMV1 187 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 C11orf63Q6NUN7 778 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 IYDQ6PHW0 289 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 STXBP4Q6ZWJ1 553 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 DENND1CQ8IV53 801 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 MYO1HQ8N1T3 1032 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PCYOX1LQ8NBM8 494 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 DDHD1Q8NEL9 900 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PPP1R14CQ8TAE6 165 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 TBC1D15Q8TC07 691 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CYB5D2Q8WUJ1 264 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 HSPH1Q92598 858 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 BORCS5Q969J3 196 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CCDC74AQ96AQ1 378 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 EFHD2Q96C19 240 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 DCUN1D1Q96GG9 259 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PIWIL1Q96J94 861 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 PLEKHA8Q96JA3 519 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 SERAC1Q96JX3 654 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 C9orf72Q96LT7 481 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PRPF18Q99633 342 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 TSG101Q99816 390 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 SH3GL1Q99961 368 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 OMDQ99983 421 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 TRIM55Q9BYV6 548 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 THAP2Q9H0W7 228 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 POLR1BQ9H9Y6 1135 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ACP6Q9NPH0 428 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 KLHL3Q9UH77 587 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 TAGLN3Q9UI15 199 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 VPS51Q9UID3 782 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 APPL1Q9UKG1 709 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ATXN7L1Q9ULK2 861 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 NME7Q9Y5B8 376 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PCDHB1Q9Y5F3 818 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 FAM237BA0A1B0GVD1 139 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 A0A1W2PQH9 124 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 FAM170AA1A519 330 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 MIF4GDA9UHW6 222 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 K7ENP7 123 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 TLR4O00206 839 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 BEST1O76090 585 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 IGHV4-34P06331 123 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ENO1P06733 434 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 MYL2P10916 166 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 NAT2P11245 290 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 MYF5P13349 255 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ATF4P18848 351 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 PRDX6P30041 224 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CORO1AP31146 461 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 LSSP48449 732 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PGFP49763 221 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 NUP107P57740 925 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ST8SIA6P61647 398 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 IFITM2Q01629 132 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 NR1D2Q14995 579 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 PRKD1Q15139 912 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 CYP2A13Q16696 494 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 DNAL1Q4LDG9 190 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 MPPE1Q53F39 396 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ZNF667Q5HYK9 610 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 C3orf38Q5JPI3 329 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 EFHC1Q5JVL4 640 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ZNF776Q68DI1 518 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 ITPRIPL1Q6GPH6 555 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 RWDD4Q6NW29 188 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 INO80CQ6PI98 192 aaPredicted RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 NCEH1Q6PIU2 408 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 USP30Q70CQ3 517 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 SV2BQ7L1I2 683 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CHST9Q7L1S5 443 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ACOT1Q86TX2 421 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CBWD2Q8IUF1 395 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 ICA1LQ8NDH6 482 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 GRIN3AQ8TCU5 1115 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 SLC2A14Q8TDB8 520 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 MZB1Q8WU39 189 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 NANOS1Q8WY41 292 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 TANKQ92844 425 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 DNAJC19Q96DA6 116 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 SNF8Q96H20 258 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 VCPIP1Q96JH7 1222 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CDK5RAP1Q96SZ6 601 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 HERPUD2Q9BSE4 406 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 CCDC106Q9BWC9 280 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 UNKQ9C0B0 810 aaKnown RBP4.48□□□□□ -1.69
MATR3-202ENST00000502422 CDH19Q9H159 772 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 C1orf21Q9H246 121 aa4.48□□□□□ -1.69
MATR3-202ENST00000502422 TMEM245Q9H330 911 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms