RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 GBP5Q96PP8 586 aa6.33□□□□□ -1.4
CRNDE-202ENST00000502066 SMURF1Q9HCE7 757 aa6.33□□□□□ -1.4
CRNDE-202ENST00000502066 PDP2Q9P2J9 529 aa6.33□□□□□ -1.4
CRNDE-202ENST00000502066 SNX7Q9UNH6 387 aa6.33□□□□□ -1.4
CRNDE-202ENST00000502066 ROS1P08922 2347 aa6.33□□□□□ -1.4
CRNDE-202ENST00000502066 STAB2Q8WWQ8 2551 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 A0A087WWV3 80 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 TTC26A0AVF1 554 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 TMEM89A2RUT3 159 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 LACTBL1A8MY62 500 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ZNF561-AS1K7EIQ3 104 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 CLIC2O15247 247 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 SPAG6O75602 509 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ATP5C1P36542 298 aaKnown RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 CACNA2D1P54289 1103 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 GUCY1A3Q02108 690 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 NR1D2Q14995 579 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 TMEM132DQ14C87 1099 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 PIP5KL1Q5T9C9 394 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 FAM46CQ5VWP2 391 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 FAM171BQ6P995 826 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 CASC1Q6TDU7 716 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 DOLPP1Q86YN1 238 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 CCDC71Q8IV32 467 aaPredicted RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 TPH2Q8IWU9 490 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 GSPT2Q8IYD1 628 aaKnown RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 BCL6BQ8N143 479 aaPredicted RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 NUP93Q8N1F7 819 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 SCAMP5Q8TAC9 235 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 EXOC6Q8TAG9 804 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ASB15Q8WXK1 588 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 C8orf48Q96LL4 319 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 OR6C1Q96RD1 312 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 KLF6Q99612 283 aaPredicted RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 REG4Q9BYZ8 158 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ZSWIM4Q9H7M6 989 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 SIDT1Q9NXL6 827 aaKnown RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ABI3Q9P2A4 366 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ORC3Q9UBD5 711 aaPredicted RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 NKX1-2Q9UD57 310 aaPredicted RBP6.32□□□□□ -1.4
CRNDE-202ENST00000502066 SLCO3A1Q9UIG8 710 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 MTMR6Q9Y217 621 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 DNAJC16Q9Y2G8 782 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ZNF510Q9Y2H8 683 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 MPDZO75970 2070 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 ABCA13Q86UQ4 5058 aa6.32□□□□□ -1.4
CRNDE-202ENST00000502066 NUP210LQ5VU65 1888 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 KPNA7A9QM74 516 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 RASA4BC9J798 803 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 K7ERI5 159 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 SCDO00767 359 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 RASA4O43374 803 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 RAB11FIP3O75154 756 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 SOX30O94993 753 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 RASGRP1O95267 797 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 STATHP02808 62 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 GPR3P46089 330 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 GNAQP50148 359 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 PSMC1P62191 440 aaKnown RBP6.31□□□□□ -1.4
CRNDE-202ENST00000502066 BIRC2Q13490 618 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 ALG11Q2TAA5 492 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 FLYWCH1Q4VC44 716 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 MACC1Q6ZN28 852 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 STRADAQ7RTN6 431 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 ZNF589Q86UQ0 364 aaPredicted RBP6.31□□□□□ -1.4
CRNDE-202ENST00000502066 PAQR7Q86WK9 346 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 RFLNBQ8N5W9 214 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 HIPK4Q8NE63 616 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 SLC22A8Q8TCC7 542 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 WFDC5Q8TCV5 224 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 MIEF2Q96C03 454 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 TMEM160Q9NX00 188 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 L1RE1Q9UN81 338 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 ERVW-1Q9UQF0 538 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
CRNDE-202ENST00000502066 A0A1W2PPR1 153 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 ERICH2A1L162 156 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 CCDC66A2RUB6 948 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 VWA3AA6NCI4 1184 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 GOLGA6L3A6NEY3 463 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 CES2O00748 559 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 AQP7O14520 342 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 PMPCBO75439 489 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 CRYABP02511 175 aaKnown RBP6.3□□□□□ -1.4
CRNDE-202ENST00000502066 HMBSP08397 361 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 ZDHHC11BP0C7U3 371 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 ABOP16442 354 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 CORO1AP31146 461 aaKnown RBP6.3□□□□□ -1.4
CRNDE-202ENST00000502066 CSKP41240 450 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 MAN2A2P49641 1150 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 EFNA5P52803 228 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 ANTXR2P58335 489 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 DAZAP2Q15038 168 aaPredicted RBP6.3□□□□□ -1.4
CRNDE-202ENST00000502066 SF3B4Q15427 424 aaKnown RBP eCLIP6.3□□□□□ -1.42e-6■■□□□ 12.9
CRNDE-202ENST00000502066 ELAVL1Q15717 326 aaKnown RBP6.3□□□□□ -1.4
CRNDE-202ENST00000502066 MPPE1Q53F39 396 aa6.3□□□□□ -1.4
CRNDE-202ENST00000502066 TDRD12Q587J7 1177 aaKnown RBP6.3□□□□□ -1.4
CRNDE-202ENST00000502066 FAM102AQ5T9C2 384 aaPredicted RBP6.3□□□□□ -1.4
CRNDE-202ENST00000502066 KAZNQ674X7 775 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms