RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 TOR1BO14657 336 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 RRP8O43159 456 aaKnown RBP16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 SNX3O60493 162 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 ANXA9O76027 345 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 KIAA0754O94854 1291 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 GM2AP17900 193 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 CCNFP41002 786 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 SRP54P61011 504 aaKnown RBP16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 MAXP61244 160 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 SEPT7Q16181 437 aaKnown RBP16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 ISXQ2M1V0 245 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 TBC1D25Q3MII6 688 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 C3orf38Q5JPI3 329 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 LINC00523Q86TU6 105 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 CNPY4Q8N129 248 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 PELI3Q8N2H9 469 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 ANKS4BQ8N8V4 417 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 DNAAF3Q8N9W5 541 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 SNIP1Q8TAD8 396 aaKnown RBP16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 MRPL40Q9NQ50 206 aaKnown RBP16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 KLQ9UEF7 1012 aa16.92■□□□□ 0.3
AP004609.1-201ENST00000498872 TMEM202A6NGA9 273 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 RASGRP1O95267 797 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 PEX11BO96011 259 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 PYGBP11216 843 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 RPIAP49247 311 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 BLKP51451 505 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 AP1S1P61966 158 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 MGAT5Q09328 741 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 CDH17Q12864 832 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 IFT88Q13099 833 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 ACOX1Q15067 660 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 AGERQ15109 404 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 PTPRRQ15256 657 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 ELOCQ15369 112 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 TMEM135Q86UB9 458 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 UNC5BQ8IZJ1 945 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 KYQ8NBH2 561 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 GLMNQ92990 594 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 FUBP1Q96AE4 644 aaKnown RBP16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 ATXN7L3BQ96GX2 97 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 WDR92Q96MX6 357 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 CCDC3Q9BQI4 270 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 IL22Q9GZX6 179 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 MKS1Q9NXB0 559 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 B4GALT6Q9UBX8 382 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 PADI4Q9UM07 663 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 SATB2Q9UPW6 733 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 RPS6KL1Q9Y6S9 549 aa16.91■□□□□ 0.3
AP004609.1-201ENST00000498872 A0A1W2PNU3 283 aaPredicted RBP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 MAGEB16A2A368 324 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 PMS2P1A4D2B8 440 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 USP1O94782 785 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 HLA-DQB2P05538 268 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 ADRA1DP25100 572 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 RENBPP51606 427 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 GEMP55040 296 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 POLR2LP62875 67 aaKnown RBP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 BMPR2Q13873 1038 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 ZKSCAN8Q15776 578 aaPredicted RBP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 ESRP1Q6NXG1 681 aaKnown RBP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 TIFABQ6ZNK6 161 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 DPPA4Q7L190 304 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 FSTL5Q8N475 847 aaPredicted RBP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 ZNF669Q96BR6 464 aaPredicted RBP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 GRAMD1AQ96CP6 724 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 CERS2Q96G23 380 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 TBATAQ96M53 351 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 ZNF599Q96NL3 588 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 LGR4Q9BXB1 951 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 NOD2Q9HC29 1040 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 RBM22Q9NW64 420 aaKnown RBP eCLIP16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 SLC17A7Q9P2U7 560 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 ATRXP46100 2492 aa16.9■□□□□ 0.3
AP004609.1-201ENST00000498872 FAM237BA0A1B0GVD1 139 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 HMX2A2RU54 273 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 COPEO14579 308 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 RFPL1O75677 317 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 ALPIP09923 528 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 DHRS4L1P0CG22 281 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 CORO7P57737 925 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 PACS1Q6VY07 963 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 SFTPA2Q8IWL1 248 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 LRRC8CQ8TDW0 803 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 OR1E3Q8WZA6 343 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 FCRL3Q96P31 734 aaPredicted RBP16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 TBL1YQ9BQ87 522 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 APOL2Q9BQE5 337 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 VPS11Q9H270 941 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 SUDS3Q9H7L9 328 aaPredicted RBP16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 POLR1BQ9H9Y6 1135 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 FGF22Q9HCT0 170 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 UBP1Q9NZI7 540 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 MOSPD1Q9UJG1 213 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 SOX13Q9UN79 622 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 GPR34Q9UPC5 381 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 ENTPD2Q9Y5L3 495 aa16.89■□□□□ 0.29
AP004609.1-201ENST00000498872 A0A0U1RQS6 177 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms