RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 OR2L2Q8NH16 312 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 LINC00615Q96LM1 132 aaPredicted RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 PWWP2AQ96N64 755 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 FCRL3Q96P31 734 aaPredicted RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 TUBB2BQ9BVA1 445 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 SCNM1Q9BWG6 230 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 RAB17Q9H0T7 212 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 STN1Q9H668 368 aaKnown RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 KLK13Q9UKR3 277 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 UTP11Q9Y3A2 253 aaKnown RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 PRSS21Q9Y6M0 314 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 KIR2DS5A0A0G2JLQ3 304 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 A0A0G2JNG1 304 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 OR5K4A6NMS3 321 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 KIR2DS3K7RE56 304 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 QSOX1O00391 747 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 OR1I1O60431 355 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 USP1O94782 785 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 AP2A2O94973 939 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 POLBP06746 335 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 PNLIPP16233 465 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 PGAM1P18669 254 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 TTPAP49638 278 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 ARL4CP56559 192 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 CALCOCO2Q13137 446 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 KIR2DS5Q14953 304 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 HIF1AQ16665 826 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 SLC9B2Q86UD5 537 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 GALNT15Q8N3T1 639 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 VPS37BQ9H9H4 285 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 IL1RAPL1Q9NZN1 696 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 SCHIP1Q9P0W5 487 aaPredicted RBP16.46■□□□□ 0.23
PRKCB-210ENST00000498739 PSMD13Q9UNM6 376 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 WASF3Q9UPY6 502 aa16.46■□□□□ 0.23
PRKCB-210ENST00000498739 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
PRKCB-210ENST00000498739 PCNX2A6NKB5 2137 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 ZCWPW2A0A1B0GU75 182 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 FAM149AA5PLN7 773 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 KLHL33A6NCF5 533 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 CASC3O15234 703 aaKnown RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 PPM1DO15297 605 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 TP73O15350 636 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 NDUFS3O75489 264 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 RPLP0P05388 317 aaKnown RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 OR56A5P0C7T3 313 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 BRAFP15056 766 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 HALP42357 657 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 FASLGP48023 281 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 ARCN1P48444 511 aaKnown RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 FOXK2Q01167 660 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 HHEXQ03014 270 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 THOC5Q13769 683 aaKnown RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 HP1BP3Q5SSJ5 553 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 AGAP9Q5VTM2 703 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 DUPD1Q68J44 220 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 MRNIPQ6NTE8 343 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 ABRAXAS1Q6UWZ7 409 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 TMPRSS7Q7RTY8 843 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 SDCCAG8Q86SQ7 713 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 TMPRSS12Q86WS5 348 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 CCNJLQ8IV13 435 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 TRIM48Q8IWZ4 208 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 CFAP206Q8IYR0 622 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 MNS1Q8NEH6 495 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 HM13Q8TCT9 377 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 EBNA1BP2Q99848 306 aaKnown RBP16.45■□□□□ 0.22
PRKCB-210ENST00000498739 CCM2Q9BSQ5 444 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 WHRNQ9P202 907 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 ANGPTL2Q9UKU9 493 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 WDR37Q9Y2I8 494 aa16.45■□□□□ 0.22
PRKCB-210ENST00000498739 C17orf113A0A1B0GUU1 675 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CTAGE15A4D2H0 777 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 MT-CO3P00414 261 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 FTH1P02794 183 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CTAGE8P0CG41 777 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 JUPP14923 745 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 ALDH4A1P30038 563 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 ELK3P41970 407 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CCL7P80098 99 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CLCA4Q14CN2 919 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 LONRF1Q17RB8 773 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-210ENST00000498739 METRNLQ641Q3 311 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 NEPROQ6NW34 567 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 WASH2PQ6VEQ5 465 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 ZNF438Q7Z4V0 828 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 SPRED1Q7Z699 444 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CTAGE6Q86UF2 777 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 ZNF761Q86XN6 746 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-210ENST00000498739 MARCH9Q86YJ5 346 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CTAGE4Q8IX94 777 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 LILRA3Q8N6C8 439 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-210ENST00000498739 WDR48Q8TAF3 677 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CXorf40BQ96DE9 158 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 LRRC1Q9BTT6 524 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 LRRN3Q9H3W5 708 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 SARS2Q9NP81 518 aaKnown RBP16.44■□□□□ 0.22
PRKCB-210ENST00000498739 WASH6PQ9NQA3 447 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms