RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 AHSGP02765 367 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 SYPP08247 313 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 NUDT17P0C025 328 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 CTSEP14091 401 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 H2AFXP16104 143 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 MSH2P43246 934 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 BLKP51451 505 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 LIMK2P53671 638 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 SPEM2Q0P670 501 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 TMED2Q15363 201 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 PYCR3Q53H96 274 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 PRRT3Q5FWE3 981 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 BEND6Q5SZJ8 279 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 FAM45BPQ6NSW5 357 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 ZNF549Q6P9A3 640 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 ZNF547Q8IVP9 402 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 OR2I1PQ8NGU4 316 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 SLC44A1Q8WWI5 657 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 ELMO1Q92556 727 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 ZNF514Q96K75 400 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 BIRC8Q96P09 236 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 PANX3Q96QZ0 392 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 ELF4Q99607 663 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 AARSD1Q9BTE6 412 aaKnown RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 LRRC61Q9BV99 259 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 TMEM168Q9H0V1 697 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 TM7SF3Q9NS93 570 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 KLF15Q9UIH9 416 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 DGKBQ9Y6T7 804 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 SGTAO43765 313 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 VPS26AO75436 327 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 FUCA1P04066 466 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 CSF2P04141 144 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 CELA2BP08218 269 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 ENGP17813 658 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 VCLP18206 1134 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 CHRM3P20309 590 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 SLCO1A2P46721 670 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 CCT8P50990 548 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 ATXN3P54252 364 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 SLC12A2P55011 1212 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 ADARP55265 1226 aaKnown RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 ILF3Q12906 894 aaKnown RBP eCLIP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 SF3A2Q15428 464 aaKnown RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 PLA2G2CQ5R387 149 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 GRTP1Q5TC63 336 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 HECTD2Q5U5R9 776 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 IL27RAQ6UWB1 636 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 NAPRTQ6XQN6 538 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 PIM3Q86V86 326 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 ZNF548Q8NEK5 533 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 DCAKDQ8WVC6 231 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 HNRNPLLQ8WVV9 542 aaKnown RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 TIMM29Q9BSF4 260 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 GAREM1Q9H706 876 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-227ENST00000498056 RAPGEFL1Q9UHV5 662 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 PLEKHM1Q9Y4G2 1056 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 COMMD10Q9Y6G5 202 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 LAMA1P25391 3075 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 DMDP11532 3685 aa13.35□□□□□ -0.27
CPNE1-227ENST00000498056 LNP1A1A4G5 178 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 PDZK1P1A8MUH7 402 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 GCAP28676 217 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 EPHA8P29322 1005 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 ACTR1BP42025 376 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SERPINB9P50453 376 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 CDKN2DP55273 166 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 ACTR1AP61163 376 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 HNRNPKP61978 463 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 IRX4P78413 519 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 C1orf61Q13536 156 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 NFE2L1Q14494 772 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 HLA-BQ31612 363 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 MROH9Q5TGP6 573 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SLC30A9Q6PML9 568 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 OTOAQ7RTW8 1153 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 AMZ2Q86W34 360 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SIDT2Q8NBJ9 832 aaKnown RBP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 CCL4L1Q8NHW4 92 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 HM13Q8TCT9 377 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 KCNJ9Q92806 393 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 ZBTB9Q96C00 473 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SCARF2Q96GP6 870 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 PHOX2BQ99453 314 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 GPR21Q99679 349 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 GPR22Q99680 433 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms