RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SYDE1Q6ZW31 735 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-208ENST00000497892 SPRED1Q7Z699 444 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 SERPINA9Q86WD7 417 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 PIANPQ8IYJ0 282 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CACTIN-AS1Q8N1I8 211 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ARL14Q8N4G2 192 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 NAT8LQ8N9F0 302 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 MCUQ8NE86 351 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 WDR48Q8TAF3 677 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 SLC37A2Q8TED4 501 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 HEXDCQ8WVB3 486 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CCDC97Q96F63 343 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-208ENST00000497892 SGSM3Q96HU1 749 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 RUNDC3BQ96NL0 473 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ABCG4Q9H172 646 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 OSGEPL1Q9H4B0 414 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 MRM3Q9HC36 420 aaKnown RBP11.06□□□□□ -0.64
ERCC8-208ENST00000497892 XAB2Q9HCS7 855 aaKnown RBP11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CHRAC1Q9NRG0 131 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 TREX1Q9NSU2 369 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 SYBUQ9NX95 663 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ZDHHC3Q9NYG2 299 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 BFARQ9NZS9 450 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 LRIT1Q9P2V4 623 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 ASIC3Q9UHC3 531 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 CLCA2Q9UQC9 943 aa11.06□□□□□ -0.64
ERCC8-208ENST00000497892 KIR2DS5A0A0G2JLQ3 304 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 A0A0G2JNG1 304 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 FAM149AA5PLN7 773 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 KLHL33A6NCF5 533 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 OR51F1A6NGY5 319 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 KIR2DS3K7RE56 304 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 SGTAO43765 313 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 KCNJ13O60928 360 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 TCEA3O75764 348 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 SLC2A4P14672 509 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 VARSP26640 1264 aaKnown RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 MAGEA3P43357 314 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 MAP1BP46821 2468 aaKnown RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 PRLHRP49683 370 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 PRAMEP78395 509 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 DR1Q01658 176 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 KIR2DS5Q14953 304 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 DBN1Q16643 649 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 RNASEH2BQ5TBB1 312 aaKnown RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 AGAP9Q5VTM2 703 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 IYDQ6PHW0 289 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 TMEM220Q6QAJ8 160 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 DET1Q7L5Y6 550 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 CAND1Q86VP6 1230 aaKnown RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 AMZ2Q86W34 360 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 JAMLQ86YT9 394 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 CCNJLQ8IV13 435 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 KLHL7Q8IXQ5 586 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 PPIL6Q8IXY8 311 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 BEND7Q8N7W2 519 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 GATA6Q92908 595 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 HDAC10Q969S8 669 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 SGF29Q96ES7 293 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 DCUN1D1Q96GG9 259 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 LINC00615Q96LM1 132 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 C16orf45Q96MC5 204 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 SERPINB12Q96P63 405 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 KIFC1Q9BW19 673 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 PRDM8Q9NQV8 689 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 DNAJC16Q9Y2G8 782 aa11.05□□□□□ -0.64
ERCC8-208ENST00000497892 DNMT3AQ9Y6K1 912 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-208ENST00000497892 FREM2Q5SZK8 3169 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 A0A1W2PQM1 296 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 OR5K4A6NMS3 321 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 RHPN2P1A8MT19 583 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 PDZK1P1A8MUH7 402 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 D6RAR5 112 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 GOLGA8MH3BSY2 632 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 NTN3O00634 580 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 DNALI1O14645 258 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 CASC3O15234 703 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 PPM1DO15297 605 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 CAPN5O15484 640 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 SNX2O60749 519 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 AVILO75366 819 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 POP7O75817 140 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 MT-CO3P00414 261 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 GOT2P00505 430 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 RPLP0P05388 317 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 ATP1B2P14415 290 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 JUPP14923 745 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 IDSP22304 550 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 GPR3P46089 330 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 TARDBPQ13148 414 aaKnown RBP eCLIP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 DHX34Q14147 1143 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 SPIDRQ14159 915 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 ITIH4Q14624 930 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 ABRAXAS1Q6UWZ7 409 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 WASH2PQ6VEQ5 465 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 PACS1Q6VY07 963 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 CERS6Q6ZMG9 384 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 RBM44Q6ZP01 1051 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 TAS2R42Q7RTR8 314 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms