RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FBXO5Q9UKT4 447 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 VPS9D1Q9Y2B5 631 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 IGLV3-16A0A075B6K0 115 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 LNP1A1A4G5 178 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 F8W8V4 182 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 CHUKO15111 745 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 SCAMP1O15126 338 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 B4GALNT1Q00973 533 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 NAA30Q147X3 362 aaPredicted RBP19.75■□□□□ 0.75
CTSD-206ENST00000497544 TYSND1Q2T9J0 566 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 TEDDM1Q5T9Z0 273 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 RNF187Q5TA31 235 aaPredicted RBP19.75■□□□□ 0.75
CTSD-206ENST00000497544 CRTC3Q6UUV7 619 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 LRRTM4Q86VH4 590 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 TRAPPC5Q8IUR0 188 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 DENND6AQ8IWF6 608 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 CDKL2Q92772 493 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 ZNF514Q96K75 400 aaPredicted RBP19.75■□□□□ 0.75
CTSD-206ENST00000497544 CLPBQ9H078 707 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 ZFATQ9P243 1243 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 SPASTQ9UBP0 616 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 APOBEC3BQ9UH17 382 aaKnown RBP19.75■□□□□ 0.75
CTSD-206ENST00000497544 PNMA8BQ9ULN7 279 aaPredicted RBP19.75■□□□□ 0.75
CTSD-206ENST00000497544 PRKAB1Q9Y478 270 aa19.75■□□□□ 0.75
CTSD-206ENST00000497544 ASCC3Q8N3C0 2202 aaKnown RBP19.75■□□□□ 0.75
CTSD-206ENST00000497544 PCDH15Q96QU1 1955 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 A0A1B0GTQ1 180 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 TCRBV9S1A1TA0A576 114 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 UBA6A0AVT1 1052 aaPredicted RBP19.74■□□□□ 0.75
CTSD-206ENST00000497544 OR2AG2A6NM03 316 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 PRMT5O14744 637 aaPredicted RBP19.74■□□□□ 0.75
CTSD-206ENST00000497544 KMOO15229 486 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 YKT6O15498 198 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 OR1I1O60431 355 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 S1PR4O95977 384 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 STX2P32856 288 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 SLC1A2P43004 574 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 PMS2P54278 862 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 KCTD16Q68DU8 428 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 ZNF449Q6P9G9 518 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 PACS1Q6VY07 963 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 TRMT10CQ7L0Y3 403 aaKnown RBP19.74■□□□□ 0.75
CTSD-206ENST00000497544 MINDY1Q8N5J2 469 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 OR2I1PQ8NGU4 316 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 FBF1Q8TES7 1133 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 OR2M4Q96R27 311 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 TCEAL2Q9H3H9 227 aaPredicted RBP19.74■□□□□ 0.75
CTSD-206ENST00000497544 IL21RQ9HBE5 538 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 INTS10Q9NVR2 710 aaKnown RBP19.74■□□□□ 0.75
CTSD-206ENST00000497544 GPR34Q9UPC5 381 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 DNMT3AQ9Y6K1 912 aaPredicted RBP19.74■□□□□ 0.75
CTSD-206ENST00000497544 UNC79Q9P2D8 2635 aa19.74■□□□□ 0.75
CTSD-206ENST00000497544 QSOX1O00391 747 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 AP2A2O94973 939 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 ACSL3O95573 720 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 CTSCP53634 463 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 BNIP3Q12983 259 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 C1orf61Q13536 156 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 PRRT3Q5FWE3 981 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 KIAA0408Q6ZU52 694 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 CHST15Q7LFX5 561 aaPredicted RBP19.73■□□□□ 0.75
CTSD-206ENST00000497544 LRRC6Q86X45 466 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 CNTN4Q8IWV2 1026 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 CLDN19Q8N6F1 224 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 C2CD4AQ8NCU7 369 aaPredicted RBP19.73■□□□□ 0.75
CTSD-206ENST00000497544 LMX1AQ8TE12 382 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 CCDC97Q96F63 343 aaPredicted RBP19.73■□□□□ 0.75
CTSD-206ENST00000497544 TMEM168Q9H0V1 697 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 FBXO6Q9NRD1 293 aaPredicted RBP19.73■□□□□ 0.75
CTSD-206ENST00000497544 TRNAU1APQ9NX07 287 aaKnown RBP19.73■□□□□ 0.75
CTSD-206ENST00000497544 NSMCE4AQ9NXX6 385 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 RAB21Q9UL25 225 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 CRYL1Q9Y2S2 319 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 PRSS21Q9Y6M0 314 aa19.73■□□□□ 0.75
CTSD-206ENST00000497544 LRP4O75096 1905 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 PCNX2A6NKB5 2137 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 SDC3O75056 442 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 POP7O75817 140 aaKnown RBP19.72■□□□□ 0.75
CTSD-206ENST00000497544 PIAS2O75928 621 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 OR56A5P0C7T3 313 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 FMO4P31512 558 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 LEPRP48357 1165 aaKnown RBP19.72■□□□□ 0.75
CTSD-206ENST00000497544 CCT8P50990 548 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 EIF3BP55884 814 aaKnown RBP19.72■□□□□ 0.75
CTSD-206ENST00000497544 IL9RQ01113 521 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 ELOCQ15369 112 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 INSCQ1MX18 579 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 BCL7AQ4VC05 210 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 PTRHD1Q6GMV3 140 aaKnown RBP19.72■□□□□ 0.75
CTSD-206ENST00000497544 LURAP1LQ8IV03 231 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 CTAGE3PQ8IX95 158 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 FSTL5Q8N475 847 aaPredicted RBP19.72■□□□□ 0.75
CTSD-206ENST00000497544 DEFB124Q8NES8 71 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 NAT14Q8WUY8 206 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 CCDC68Q9H2F9 335 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 TMEM9BQ9NQ34 198 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 TM7SF3Q9NS93 570 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 TXNDC16Q9P2K2 825 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 DOLKQ9UPQ8 538 aa19.72■□□□□ 0.75
CTSD-206ENST00000497544 NEMP2A6NFY4 417 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms