RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PADI3Q9ULW8 664 aa3.93□□□□□ -1.78
SMC4-225ENST00000497203 LILRA5A6NI73 299 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 C4orf47A7E2U8 309 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 C15orf62A8K5M9 175 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ANKRD66B4E2M5 251 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TMEM189-UBE2V1I3L0A0 370 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 CLDN14O95500 239 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TRUB2O95900 331 aaKnown RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 S1PR1P21453 382 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 USP8P40818 1118 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TMPOP42166 694 aaKnown RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 RAB28P51157 221 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ZNF41P51814 821 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 SEC61A1P61619 476 aaKnown RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 BNC1Q01954 994 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ZNF155Q12901 538 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 TRAF3Q13114 568 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 MYBPHQ13203 477 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 UBE2V1Q13404 147 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 MELKQ14680 651 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TMEM35AQ53FP2 167 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ARMC4Q5T2S8 1044 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TMEM211Q6ICI0 200 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ZNF704Q6ZNC4 412 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 DENND5BQ6ZUT9 1274 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ANKRD23Q86SG2 305 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ADIPOR2Q86V24 386 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 IQCHQ86VS3 1027 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 SPATA2LQ8IUW3 424 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 FBXO39Q8N4B4 442 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 NKAIN3Q8N8D7 197 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 KCNH5Q8NCM2 988 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 PAPD5Q8NDF8 572 aaKnown RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 RBM15BQ8NDT2 890 aaKnown RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 OR6J1Q8NGC5 347 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 OR5R1Q8NH85 324 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 CFAP61Q8NHU2 1237 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 HMGCLL1Q8TB92 370 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TBC1D16Q8TBP0 767 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 TEKT4Q8WW24 435 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 PIGTQ969N2 578 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 VPS33AQ96AX1 596 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 HDAC11Q96DB2 347 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ERLEC1Q96DZ1 483 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 SPACA9Q96E40 222 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 SCMH1Q96GD3 660 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 MS4A10Q96PG2 267 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ZNF385AQ96PM9 386 aaKnown RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 RAB3IPQ96QF0 476 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 CSF3RQ99062 836 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ANKZF1Q9H8Y5 726 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 SH3GLB2Q9NR46 395 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 HAO2Q9NYQ3 351 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 WDR35Q9P2L0 1181 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 VDAC3Q9Y277 283 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 B3GALT5Q9Y2C3 310 aa3.92□□□□□ -1.78
SMC4-225ENST00000497203 ASTN2O75129 1339 aaPredicted RBP3.92□□□□□ -1.78
SMC4-225ENST00000497203 EDDM13A0A1B0GTR0 161 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 A0A1W2PP11 408 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 DVL1O14640 695 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 MID1O15344 667 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 SSX4O60224 188 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 TSPAN1O60635 241 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 CREG1O75629 220 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 HSPA4LO95757 839 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 HSP90AB1P08238 724 aaKnown RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 LINGO3P0C6S8 592 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 FCGR1AP12314 374 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 SCG2P13521 617 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 DAOP14920 347 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 PFKFB1P16118 471 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 ERCC2P18074 760 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 POLR2CP19387 275 aaPredicted RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 SP100P23497 879 aaPredicted RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 CORO1AP31146 461 aaKnown RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 GNL1P36915 607 aaPredicted RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 ZNF75DP51815 510 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 EEF1A1P68104 462 aaKnown RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 TUBA1BP68363 451 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 CDK3Q00526 305 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 COG2Q14746 738 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 KLHL22Q53GT1 634 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 KRBOX4Q5JUW0 171 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 EEF1A1P5Q5VTE0 462 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 RHBDF2Q6PJF5 856 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 PLEKHM3Q6ZWE6 761 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 ZNF34Q8IZ26 560 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 C1orf52Q8N6N3 182 aaKnown RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 XXYLT1Q8NBI6 393 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 ZNF114Q8NC26 417 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 EXD1Q8NHP7 514 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 WDR20Q8TBZ3 569 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 TAS1R2Q8TE23 839 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 TMED6Q8WW62 240 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 SLC44A1Q8WWI5 657 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 CDCA5Q96FF9 252 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 TMEM19Q96HH6 336 aa3.91□□□□□ -1.78
SMC4-225ENST00000497203 ZNF830Q96NB3 372 aaPredicted RBP3.91□□□□□ -1.78
SMC4-225ENST00000497203 SLC22A12Q96S37 553 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms