RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
THBS3-208ENST00000496332 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 NAT14Q8WUY8 206 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 UBE2Q2Q8WVN8 375 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 ART4Q93070 314 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 SGF29Q96ES7 293 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 ZNF514Q96K75 400 aaPredicted RBP11.62□□□□□ -0.55
THBS3-208ENST00000496332 FAM96AQ9H5X1 160 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 LRRC40Q9H9A6 602 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 SLC40A1Q9NP59 571 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 POT1Q9NUX5 634 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 OGFRQ9NZT2 677 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 PSMD13Q9UNM6 376 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 PCDHGA3Q9Y5H0 932 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 SLC30A1Q9Y6M5 507 aa11.62□□□□□ -0.55
THBS3-208ENST00000496332 ZFC3H1O60293 1989 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 EIF4E1BA6NMX2 242 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 B4E171 279 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 K7ENP7 123 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 ATXN7O15265 892 aaPredicted RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 PSMD3O43242 534 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 EFSO43281 561 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 LIASO43766 372 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 AMD1P17707 334 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 PBLDP30039 288 aaPredicted RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 STIP1P31948 543 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 HADHAP40939 763 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 TSPAN7P41732 249 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 ARSDP51689 593 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 GPR18Q14330 331 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 NFE2L1Q14494 772 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 OASLQ15646 514 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 METRNLQ641Q3 311 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 INO80CQ6PI98 192 aaPredicted RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 DTX1Q86Y01 620 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 PLXDC1Q8IUK5 500 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 RBM12BQ8IXT5 1001 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 BMPERQ8N8U9 685 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 SNRNP27Q8WVK2 155 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 C1orf54Q8WWF1 131 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 ULK4Q96C45 1275 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 RTP4Q96DX8 246 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 DCUN1D1Q96GG9 259 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 DNAJC1Q96KC8 554 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 C19orf43Q9BQ61 176 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 DDA1Q9BW61 102 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 FRMD8P1Q9BZ68 369 aaPredicted RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 LZTFL1Q9NQ48 299 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 PIH1D1Q9NWS0 290 aaKnown RBP11.61□□□□□ -0.55
THBS3-208ENST00000496332 CRLS1Q9UJA2 301 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 ZNF148Q9UQR1 794 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 B3GALT1Q9Y5Z6 326 aa11.61□□□□□ -0.55
THBS3-208ENST00000496332 MGAT4DA6NG13 374 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 AGAP14A8MT82 685 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 STMND1H3BQB6 276 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 CAPN5O15484 640 aaPredicted RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 AP2A1O95782 977 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 CCDC175P0C221 793 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 RALBP11234 206 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 ITGALP20701 1170 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 MC4RP32245 332 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 GFERP55789 205 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 MC2RQ01718 297 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 RHDQ02161 417 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 SNX1Q13596 522 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 SEPT6Q14141 434 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 POU6F1Q14863 301 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 RPE65Q16518 533 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 BCL7AQ4VC05 210 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 MANEAQ5SRI9 462 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 DCAF12Q5T6F0 453 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 ANKS6Q68DC2 871 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 MICALCLQ6ZW33 695 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 SNX20Q7Z614 316 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 VASH2Q86V25 355 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 NXPE1Q8N323 547 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 LSM14AQ8ND56 463 aaKnown RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 OR2L2Q8NH16 312 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 JPH3Q8WXH2 748 aaPredicted RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 C9orf72Q96LT7 481 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 TGM7Q96PF1 710 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 COPS8Q99627 209 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 CTRCQ99895 268 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 ASPSCR1Q9BZE9 553 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 NLE1Q9NVX2 485 aaPredicted RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 FAM8A1Q9UBU6 413 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 ATMQ13315 3056 aa11.6□□□□□ -0.55
THBS3-208ENST00000496332 MN1Q10571 1320 aaPredicted RBP11.6□□□□□ -0.55
THBS3-208ENST00000496332 KALRNO60229 2985 aa11.59□□□□□ -0.55
THBS3-208ENST00000496332 ERVH48-1M5A8F1 160 aa11.59□□□□□ -0.55
THBS3-208ENST00000496332 SGTAO43765 313 aa11.59□□□□□ -0.55
THBS3-208ENST00000496332 IFNB1P01574 187 aa11.59□□□□□ -0.55
THBS3-208ENST00000496332 C9P02748 559 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms