RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 WASH6PQ9NQA3 447 aa20.27■□□□□ 0.84
COL9A2-211ENST00000496215 HOMER3Q9NSC5 361 aa20.27■□□□□ 0.84
COL9A2-211ENST00000496215 DRG1Q9Y295 367 aaKnown RBP20.27■□□□□ 0.84
COL9A2-211ENST00000496215 DNMT3AQ9Y6K1 912 aaPredicted RBP20.27■□□□□ 0.84
COL9A2-211ENST00000496215 KLHL33A6NCF5 533 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 OR52A4PA6NMU1 304 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 HGSO14964 777 aaPredicted RBP20.26■□□□□ 0.83
COL9A2-211ENST00000496215 ZSCAN5DPP0CG00 497 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 THRAP10827 490 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 BRAFP15056 766 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 TRA2AQ13595 282 aaKnown RBP eCLIP20.26■□□□□ 0.83
COL9A2-211ENST00000496215 C16orf72Q14CZ0 275 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 BCL7AQ4VC05 210 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 ZRANB3Q5FWF4 1079 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 C4orf22Q6V702 233 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 PDZD3Q86UT5 571 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 JAMLQ86YT9 394 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 RCBTB1Q8NDN9 531 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 HEXDCQ8WVB3 486 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 KCNE4Q8WWG9 221 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 CXorf40BQ96DE9 158 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 SGF29Q96ES7 293 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 UCK1Q9HA47 277 aa20.26■□□□□ 0.83
COL9A2-211ENST00000496215 CCDC78A2IDD5 438 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 HEATR9A2RTY3 570 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 MROH6A6NGR9 719 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 HOXB3P14651 431 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 ITIH1P19827 911 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 MSNP26038 577 aaKnown RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 RPL22P35268 128 aaKnown RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 BASP1P80723 227 aaKnown RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 CFHR1Q03591 330 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 LAMB3Q13751 1172 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 NFE2L1Q14494 772 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 CCDC38Q502W7 563 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 TMEM71Q6P5X7 295 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 WDR74Q6RFH5 385 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 FAM83HQ6ZRV2 1179 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 REXO1L1PQ8IX06 675 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 RBM12BQ8IXT5 1001 aaKnown RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 BEND7Q8N7W2 519 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 NAF1Q96HR8 494 aaKnown RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 TBC1D10AQ9BXI6 508 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 EIF2B3Q9NR50 452 aaKnown RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 ZDHHC3Q9NYG2 299 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 TMEM9Q9P0T7 183 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 ZNF624Q9P2J8 865 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-211ENST00000496215 PCDHGA7Q9Y5G6 932 aa20.25■□□□□ 0.83
COL9A2-211ENST00000496215 TRBV5-4A0A0C4DH59 114 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 MPSTP25325 297 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 ACRV1P26436 265 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 SLC19A1P41440 591 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 PRLHRP49683 370 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 CACNG1Q06432 222 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 SKIDA1Q1XH10 827 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 TMEM26Q6ZUK4 368 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 MICALCLQ6ZW33 695 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 TAS2R42Q7RTR8 314 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 SERPINA9Q86WD7 417 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 SPACA3Q8IXA5 215 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 PRELID2Q8N945 189 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 OR2L2Q8NH16 312 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 NAT14Q8WUY8 206 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 NCSTNQ92542 709 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 CCDC97Q96F63 343 aaPredicted RBP20.24■□□□□ 0.83
COL9A2-211ENST00000496215 CDKN2AIPNLQ96HQ2 116 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 PBKQ96KB5 322 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 CASS4Q9NQ75 786 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 FAM8A1Q9UBU6 413 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 PSMD13Q9UNM6 376 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 WDR37Q9Y2I8 494 aa20.24■□□□□ 0.83
COL9A2-211ENST00000496215 CACNA1GO43497 2377 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 IGLV3-16A0A075B6K0 115 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 MGAT4DA6NG13 374 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 KIF5CO60282 957 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 ATP1B2P14415 290 aaPredicted RBP20.23■□□□□ 0.83
COL9A2-211ENST00000496215 GRIA1P42261 906 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 KCNJ1P48048 391 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 MAPK10P53779 464 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 TLE3Q04726 772 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 SLC35F6Q8N357 371 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 RASGEF1CQ8N431 466 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 AGBL5Q8NDL9 886 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 PPHLN1Q8NEY8 458 aaKnown RBP20.23■□□□□ 0.83
COL9A2-211ENST00000496215 RANBP9Q96S59 729 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 NAP1L3Q99457 506 aaPredicted RBP20.23■□□□□ 0.83
COL9A2-211ENST00000496215 VPS37BQ9H9H4 285 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 ATMQ13315 3056 aa20.23■□□□□ 0.83
COL9A2-211ENST00000496215 PGRMC1O00264 195 aaKnown RBP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 SGTAO43765 313 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 UBXN7O94888 489 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 SLC35G4P0C7Q5 338 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 PRSS56P0CW18 603 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 PSMA3P25788 255 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 SLC5A2P31639 672 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 CSTF2P33240 577 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 ETV5P41161 510 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 CDKN1CP49918 316 aaPredicted RBP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 ARSDP51689 593 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 GPR18Q14330 331 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms