RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CCM2LQ9NUG4 571 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ABCB8Q9NUT2 735 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CMTM6Q9NX76 183 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 CNOT6Q9ULM6 557 aaKnown RBP10.93□□□□□ -0.66
CMSS1-208ENST00000496116 OARD1Q9Y530 152 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 ASB1Q9Y576 335 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 PCDHA9Q9Y5H5 950 aa10.93□□□□□ -0.66
CMSS1-208ENST00000496116 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 DHRS12A0PJE2 317 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 FAM234BA2RU67 622 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 TEX28O15482 410 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 MAP3K13O43283 966 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 SLC25A14O95258 325 aaPredicted RBP10.92□□□□□ -0.66
CMSS1-208ENST00000496116 TRIM16O95361 564 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 CLDN7O95471 211 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 LRG1P02750 347 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 CAPN1P07384 714 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 PABPC4LP0CB38 370 aaKnown RBP10.92□□□□□ -0.66
CMSS1-208ENST00000496116 PSMC3P17980 439 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 ATP6V1B2P21281 511 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 CA8P35219 290 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 HNF1BP35680 557 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 PPM1AP35813 382 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 SPAM1P38567 509 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 UFM1P61960 85 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 SLC7A9P82251 487 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 CYP4F8P98187 520 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 LMAN2Q12907 356 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 PRKG2Q13237 762 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 NRF1Q16656 503 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 GPR33Q49SQ1 333 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 AASDHQ4L235 1098 aaPredicted RBP10.92□□□□□ -0.66
CMSS1-208ENST00000496116 MTX3Q5HYI7 312 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 C6orf52Q5T4I8 152 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 GRAMD4Q6IC98 578 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 LETMD1Q6P1Q0 360 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 SCIMPQ6UWF3 145 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 ERMP1Q7Z2K6 904 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 GPR65Q8IYL9 337 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 CMTR2Q8IYT2 770 aaKnown RBP10.92□□□□□ -0.66
CMSS1-208ENST00000496116 CBARPQ8N350 705 aaPredicted RBP10.92□□□□□ -0.66
CMSS1-208ENST00000496116 TMEM199Q8N511 208 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 FIBCD1Q8N539 461 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 FIBINQ8TAL6 211 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 C1orf50Q9BV19 199 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 SPATA16Q9BXB7 569 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 ALG2Q9H553 416 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 COQ10BQ9H8M1 238 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 IL26Q9NPH9 171 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 PLK2Q9NYY3 685 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 UBAP1Q9NZ09 502 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
CMSS1-208ENST00000496116 TRBV5-4A0A0C4DH59 114 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 CXorf51AA0A1B0GTR3 108 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SMIM31A0A1B0GVY4 71 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ENO4A6NNW6 628 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 GAPDHSO14556 408 aaPredicted RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 GLUD1P00367 558 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 BMP2P12643 396 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 MSH3P20585 1137 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 HMOX2P30519 316 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 PTPN5P54829 565 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SNRPD1P62314 119 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 CDKL1Q00532 357 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 PLEKHG6Q3KR16 790 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TTLL9Q3SXZ7 439 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 PRR23BQ6ZRT6 265 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ZBTB49Q6ZSB9 765 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 Q6ZSR9 355 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TPGS1Q6ZTW0 290 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SPPL2CQ8IUH8 684 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ZBTB2Q8N680 514 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 DCBLD1Q8N8Z6 715 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 OR4F6Q8NGB9 312 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 OR2AP1Q8NGE2 309 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 DNAJB14Q8TBM8 379 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 VPS33AQ96AX1 596 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TEX37Q96LM6 180 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 EGFL8Q99944 293 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 BOCQ9BWV1 1114 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF696Q9H7X3 374 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 IPPKQ9H8X2 491 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 RC3H2Q9HBD1 1191 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SLC24A3Q9HC58 644 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 PAPOLBQ9NRJ5 636 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 CFAP97Q9P2B7 532 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 EGFL7Q9UHF1 273 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ANGPTL3Q9Y5C1 460 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TRAV19A0A0A6YYK7 116 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 KANSL1LA0AUZ9 987 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 IFRD1O00458 451 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms