RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ZNHIT2	Q9UHR6	403 aa		11.73	□□□□□ -0.53
APTX-233	ENST00000496030	MOSPD1	Q9UJG1	213 aa		11.73	□□□□□ -0.53
APTX-233	ENST00000496030	MAD1L1	Q9Y6D9	718 aa		11.73	□□□□□ -0.53
APTX-233	ENST00000496030	RPS6KL1	Q9Y6S9	549 aa		11.73	□□□□□ -0.53
APTX-233	ENST00000496030	FAM169A	Q9Y6X4	670 aa		11.73	□□□□□ -0.53
APTX-233	ENST00000496030	LY6G6E	A0A0G2JKS1	128 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	GOLGA8K	D6RF30	607 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030		H3BM21	787 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	GOLGA8T	H3BQL2	631 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	NDC80	O14777	642 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	CD3EAP	O15446	510 aa	Known RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	GRID2	O43424	1007 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	USP1	O94782	785 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	PGAM1	P18669	254 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	AK4	P27144	223 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	ECHS1	P30084	290 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	PRAME	P78395	509 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	CAV1	Q03135	178 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	PDIA2	Q13087	525 aa	Known RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	SUZ12	Q15022	739 aa	Known RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	ZNF658B	Q4V348	819 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	STEAP4	Q687X5	459 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	SFTPA2	Q8IWL1	248 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	FSTL5	Q8N475	847 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	CLDN19	Q8N6F1	224 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	EID2	Q8N6I1	236 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	GPR150	Q8NGU9	434 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	OR4C6	Q8NH72	309 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	GDAP1	Q8TB36	358 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	ZNF669	Q96BR6	464 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	LRRC39	Q96DD0	335 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	SGF29	Q96ES7	293 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	COPS8	Q99627	209 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.72	□□□□□ -0.53
APTX-233	ENST00000496030	IL1RAPL1	Q9NZN1	696 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	SAMD15	Q9P1V8	674 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	CRLS1	Q9UJA2	301 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	CHMP2B	Q9UQN3	213 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	PRSS21	Q9Y6M0	314 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030		U3KQA8	63 aa		11.72	□□□□□ -0.53
APTX-233	ENST00000496030	TPP1	O14773	563 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	FFAR2	O15552	330 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	FLRT2	O43155	660 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	SIGLEC6	O43699	453 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	TLX3	O43711	291 aa	Predicted RBP	11.71	□□□□□ -0.53
APTX-233	ENST00000496030	OR1I1	O60431	355 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	EML2	O95834	649 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	POLB	P06746	335 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	CTSE	P14091	401 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	MSH3	P20585	1137 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	GRK6	P43250	576 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	CARS	P49589	748 aa	Known RBP	11.71	□□□□□ -0.53
APTX-233	ENST00000496030	CRYM	Q14894	314 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	ELOC	Q15369	112 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	SMAD1	Q15797	465 aa	Known RBP	11.71	□□□□□ -0.53
APTX-233	ENST00000496030	DEFB133	Q30KQ1	61 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	PROX2	Q3B8N5	592 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	FASTKD1	Q53R41	847 aa	Known RBP	11.71	□□□□□ -0.53
APTX-233	ENST00000496030	NEPRO	Q6NW34	567 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	OGFOD3	Q6PK18	319 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	LVRN	Q6Q4G3	990 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	TMEM220	Q6QAJ8	160 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	PACS1	Q6VY07	963 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	CERS6	Q6ZMG9	384 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	UNC5A	Q6ZN44	842 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	CENPU	Q71F23	418 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	GALNT13	Q8IUC8	556 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	ANKMY2	Q8IV38	441 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	SDR16C5	Q8N3Y7	309 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	NAT9	Q9BTE0	207 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	CATSPERZ	Q9NTU4	200 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	NLGN3	Q9NZ94	848 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	GPR34	Q9UPC5	381 aa		11.71	□□□□□ -0.53
APTX-233	ENST00000496030	COL5A1	P20908	1838 aa	Predicted RBP	11.71	□□□□□ -0.54
APTX-233	ENST00000496030	RP1	P56715	2156 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030		A6NCN8	305 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	NEMP2	A6NFY4	417 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	OR2AG2	A6NM03	316 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	KMO	O15229	486 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	EIF3H	O15372	352 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	POP7	O75817	140 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	TTC4	O95801	387 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	S1PR4	O95977	384 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	MYF5	P13349	255 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	ACP5	P13686	325 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	ATP1B2	P14415	290 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	ZNF7	P17097	686 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	AKT1	P31749	480 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	EIF2S3	P41091	472 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	CLCNKA	P51800	687 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	LRP8	Q14114	963 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	FRG1	Q14331	258 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	ITIH4	Q14624	930 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	LONRF1	Q17RB8	773 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	TYSND1	Q2T9J0	566 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	BCL7A	Q4VC05	210 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	ZNF789	Q5FWF6	425 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	SPANXN3	Q5MJ09	141 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	LYPLAL1	Q5VWZ2	237 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms