RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 MYOFQ9NZM1 2061 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 TRAF3IP3Q9Y228 551 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
VIM-207ENST00000495528 PI4KAP42356 2102 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 MYO18AQ92614 2054 aaKnown RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 UBE4BO95155 1302 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 GOLGA6L3A6NEY3 463 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 NEDD8-MDP1E9PL57 170 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 IKBKBO14920 756 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 EXOC3O60645 756 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 CBFA2T3O75081 653 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 FGFR1OPO95684 399 aaKnown RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 NR3C1P04150 777 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 HGFP14210 728 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 NR2F2P24468 414 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 PRKAR1BP31321 381 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 ALDH9A1P49189 494 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 PTH2RP49190 550 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 CASP4P49662 377 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 TUBP50607 506 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 SNRPFP62306 86 aaKnown RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 TPM4P67936 248 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 MYL5Q02045 173 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 LRRC63Q05C16 580 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 CYP24A1Q07973 514 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 CCNIQ14094 377 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 PSMD6Q15008 389 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 COL28A1Q2UY09 1125 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 ZNF750Q32MQ0 723 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 CERCAMQ5T4B2 595 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 PLAG1Q6DJT9 500 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 HIBCHQ6NVY1 386 aaPredicted RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 NAXDQ8IW45 347 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 XXYLT1Q8NBI6 393 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 XPO6Q96QU8 1125 aaKnown RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 BBS2Q9BXC9 721 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 NACA2Q9H009 215 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 SDCBP2Q9H190 292 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 SMYD3Q9H7B4 428 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 IL21RQ9HBE5 538 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 DMAC2Q9NW81 257 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 COMMD8Q9NX08 183 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 OSER1Q9NX31 292 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 WSB2Q9NYS7 404 aaPredicted RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 CGNQ9P2M7 1197 aaKnown RBP6.62□□□□□ -1.35
VIM-207ENST00000495528 NFE2L3Q9Y4A8 694 aa6.62□□□□□ -1.35
VIM-207ENST00000495528 WDFY3Q8IZQ1 3526 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 PCDH15Q96QU1 1955 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 ADAMTS9Q9P2N4 1935 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 CCDC151A5D8V7 595 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 RASA4BC9J798 803 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 MDM4O15151 490 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 RASA4O43374 803 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 CACNG3O60359 315 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 INMTO95050 263 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 NXPH3O95157 252 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 CCDC130P13994 396 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 GNSP15586 552 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 ATICP31939 592 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 PSMC2P35998 433 aaKnown RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 ATP5C1P36542 298 aaKnown RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 MTIF2P46199 727 aaKnown RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 BNC1Q01954 994 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 COL10A1Q03692 680 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 GRIK2Q13002 908 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 PMS2P11Q13670 270 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 EDRF1Q3B7T1 1238 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 CCDC40Q4G0X9 1142 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 ZCWPW2Q504Y3 356 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 PLAC9Q5JTB6 97 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 WDR45BQ5MNZ6 344 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 TSTD2Q5T7W7 516 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 SCARA5Q6ZMJ2 495 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 ACOT1Q86TX2 421 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 CAND1Q86VP6 1230 aaKnown RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 MARCH9Q86YJ5 346 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 GOLGA5Q8TBA6 731 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 DNASE2BQ8WZ79 361 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 SMARCD1Q96GM5 515 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 DUSP26Q9BV47 211 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 GPR174Q9BXC1 333 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 VPS16Q9H269 839 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 THAP9Q9H5L6 903 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 NMUR1Q9HB89 426 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 CSNK1G1Q9HCP0 422 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 ITM2CQ9NQX7 267 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 TLR8Q9NR97 1041 aaKnown RBP6.61□□□□□ -1.35
VIM-207ENST00000495528 PLK2Q9NYY3 685 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 WDR35Q9P2L0 1181 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 ZNHIT2Q9UHR6 403 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 TLK1Q9UKI8 766 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 FRMD4BQ9Y2L6 1034 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 STON1Q9Y6Q2 735 aa6.61□□□□□ -1.35
VIM-207ENST00000495528 DMXL2Q8TDJ6 3036 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms