RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PSTPIP1O43586 416 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 POP7O75817 140 aaKnown RBP22.77■■□□□ 1.24
COL27A1-208ENST00000494780 CCNYL3P0C7X3 344 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 FECHP22830 423 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 FOXK1P85037 733 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 CHRNA6Q15825 494 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 PPP2R5EQ16537 467 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 KAZNQ674X7 775 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 KLHL35Q6PF15 583 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 SPOCD1Q6ZMY3 1216 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 SLC25A41Q8N5S1 370 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 RASGEF1AQ8N9B8 481 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 DDHD1Q8NEL9 900 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 UBXN4Q92575 508 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 P3H4Q92791 437 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 RNF31Q96EP0 1072 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 MRGPRX2Q96LB1 330 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 PDE7BQ9NP56 450 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 PADI1Q9ULC6 663 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 POLHQ9Y253 713 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 PCDHGA6Q9Y5G7 932 aa22.77■■□□□ 1.24
COL27A1-208ENST00000494780 GLYATL1P3A0A0U1RQE8 302 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A9O60656 530 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 RECKO95980 971 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A6P19224 532 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 HLA-DPA1P20036 260 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A1P22309 533 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A4P22310 534 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 CHRNA4P43681 627 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 CTSCP53634 463 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 ITGA9Q13797 1035 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 SLC1A5Q15758 541 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 RPE65Q16518 533 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 TFDP3Q5H9I0 405 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 FAM151BQ6UXP7 276 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 PID1Q7Z2X4 250 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 GLT6D1Q7Z4J2 308 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 BLOC1S5Q8TDH9 187 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 OXNAD1Q96HP4 312 aaPredicted RBP22.76■■□□□ 1.23
COL27A1-208ENST00000494780 SLC41A2Q96JW4 573 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 FCRL4Q96PJ5 515 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A7Q9HAW7 530 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A10Q9HAW8 530 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 UGT1A8Q9HAW9 530 aa22.76■■□□□ 1.23
COL27A1-208ENST00000494780 KATNA1O75449 491 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 PTMSP20962 102 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 MPP3Q13368 585 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 ERV3-1Q14264 604 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 GPRC6AQ5T6X5 926 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 TMEM220Q6QAJ8 160 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 ZC3H18Q86VM9 953 aaKnown RBP22.75■■□□□ 1.23
COL27A1-208ENST00000494780 ZNF567Q8N184 647 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 SIDT2Q8NBJ9 832 aaKnown RBP22.75■■□□□ 1.23
COL27A1-208ENST00000494780 GPR150Q8NGU9 434 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 SMOXQ9NWM0 555 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 RARRES3Q9UL19 164 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 PKP3Q9Y446 797 aa22.75■■□□□ 1.23
COL27A1-208ENST00000494780 IGHV5-51A0A0C4DH38 117 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 MKRN2OSH3BPM6 223 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 HADHBP55084 474 aaKnown RBP22.74■■□□□ 1.23
COL27A1-208ENST00000494780 PPP1CAP62136 330 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 ADCY2Q08462 1091 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 KLRB1Q12918 225 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 TUBB3Q13509 450 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 DNASE1L3Q13609 305 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 LLGL1Q15334 1064 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 FAM83HQ6ZRV2 1179 aaPredicted RBP22.74■■□□□ 1.23
COL27A1-208ENST00000494780 BPHLQ86WA6 291 aaPredicted RBP22.74■■□□□ 1.23
COL27A1-208ENST00000494780 KMT5CQ86Y97 462 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 IPMKQ8NFU5 416 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 ZNF514Q96K75 400 aaPredicted RBP22.74■■□□□ 1.23
COL27A1-208ENST00000494780 QKIQ96PU8 341 aaKnown RBP eCLIP22.74■■□□□ 1.23
COL27A1-208ENST00000494780 LHX9Q9NQ69 397 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 TRHDEQ9UKU6 1024 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 PSMD13Q9UNM6 376 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 TP53TG5Q9Y2B4 290 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 ALG6Q9Y672 507 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 NAV2Q8IVL1 2488 aa22.74■■□□□ 1.23
COL27A1-208ENST00000494780 hCG_1818297A0A087WSY0 165 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 OR2AG2A6NM03 316 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 HACD1B0YJ81 288 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 C21orf140B9A014 251 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 F5H423 210 aaPredicted RBP22.73■■□□□ 1.23
COL27A1-208ENST00000494780 GAPDHSO14556 408 aaPredicted RBP22.73■■□□□ 1.23
COL27A1-208ENST00000494780 GPR39O43194 453 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 CREG1O75629 220 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 ZRANB2O95218 330 aaKnown RBP eCLIP22.73■■□□□ 1.23
COL27A1-208ENST00000494780 FURINP09958 794 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 FOLR1P15328 257 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 CA5AP35218 305 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 ACY1Q03154 408 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 NFE2L1Q14494 772 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 PLCL1Q15111 1095 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 IGFBP7Q16270 282 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 LONRF2Q1L5Z9 754 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 METRNLQ641Q3 311 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 TCTN3Q6NUS6 607 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 CNGA4Q8IV77 575 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 KATNAL2Q8IYT4 538 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 CD180Q99467 661 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms