RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 WASH2PQ6VEQ5 465 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 PIANPQ8IYJ0 282 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 OR2L2Q8NH16 312 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 OR4L1Q8NH43 312 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 OR10G6Q8NH81 332 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 CPT1BQ92523 772 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 RUNDC3BQ96NL0 473 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 FOXP3Q9BZS1 431 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 RDH14Q9HBH5 336 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 EPB41L5Q9HCM4 733 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 WASH6PQ9NQA3 447 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 SYBUQ9NX95 663 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 SCHIP1Q9P0W5 487 aaPredicted RBP15.65■□□□□ 0.1
LIME1-209ENST00000494776 SAMD15Q9P1V8 674 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 RNF14Q9UBS8 474 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 PSMD13Q9UNM6 376 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 NEU2Q9Y3R4 380 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 IGHV1OR21-1A0A087WYE8 117 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 OR52A4PA6NMU1 304 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 AVILO75366 819 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 MPOP05164 745 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 CD1CP29017 333 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 FOXN2P32314 431 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 NSG1P42857 185 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 MAGEA6P43360 314 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 MAPK9P45984 424 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 PRLHRP49683 370 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 GABREP78334 506 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 GPLD1P80108 840 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 ACVR1Q04771 509 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 C3orf38Q5JPI3 329 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 PHF19Q5T6S3 580 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 ZNF449Q6P9G9 518 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 FAM83HQ6ZRV2 1179 aaPredicted RBP15.64■□□□□ 0.09
LIME1-209ENST00000494776 ZNF534Q76KX8 674 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 PPIL6Q8IXY8 311 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 CFAP206Q8IYR0 622 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 OTUD6BQ8N6M0 293 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 KDF1Q8NAX2 398 aaPredicted RBP15.64■□□□□ 0.09
LIME1-209ENST00000494776 CCDC97Q96F63 343 aaPredicted RBP15.64■□□□□ 0.09
LIME1-209ENST00000494776 XAB2Q9HCS7 855 aaKnown RBP15.64■□□□□ 0.09
LIME1-209ENST00000494776 PCYOX1Q9UHG3 505 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 ACSL5Q9ULC5 683 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 ASXL3Q9C0F0 2248 aa15.64■□□□□ 0.09
LIME1-209ENST00000494776 RP1P56715 2156 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 IGLV3-16A0A075B6K0 115 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 PRR19A6NJB7 356 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 F8W8V4 182 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 CCDC188H7C350 402 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 QSOX1O00391 747 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 DUX1O43812 170 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 KRT37O76014 449 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 AP2A2O94973 939 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 POLBP06746 335 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 BRAFP15056 766 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 NMBRP28336 390 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 SLC19A1P41440 591 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 ETF1P62495 437 aaKnown RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 UBE2IP63279 158 aaKnown RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 DR1Q01658 176 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 ITIH4Q14624 930 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 CLCA4Q14CN2 919 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 RTP5Q14D33 572 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 CLPPQ16740 277 aaPredicted RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 AARS2Q5JTZ9 985 aaKnown RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 METRNLQ641Q3 311 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 SYT10Q6XYQ8 523 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 CERS6Q6ZMG9 384 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 B3GNT8Q7Z7M8 397 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 LSMEM2Q8N112 164 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 CLDN19Q8N6F1 224 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 MCUQ8NE86 351 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 HM13Q8TCT9 377 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 LINC00615Q96LM1 132 aaPredicted RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 CCM2Q9BSQ5 444 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 POLR1BQ9H9Y6 1135 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 MRM3Q9HC36 420 aaKnown RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 CATSPERZQ9NTU4 200 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 POT1Q9NUX5 634 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 AKAP7Q9P0M2 348 aaPredicted RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 ZNF624Q9P2J8 865 aaPredicted RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 SATB2Q9UPW6 733 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 WDR37Q9Y2I8 494 aa15.63■□□□□ 0.09
LIME1-209ENST00000494776 ZFC3H1O60293 1989 aaKnown RBP15.63■□□□□ 0.09
LIME1-209ENST00000494776 CCDC187A0A096LP49 1063 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SDR42E2A6NKP2 422 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 AGRPO00253 132 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SGTAO43765 313 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 BRINP1O60477 761 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 TMEM63AO94886 807 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 SLC35G4P0C7Q5 338 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 OR56A5P0C7T3 313 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 MLNP12872 115 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 PAMP19021 973 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 RBMS1P29558 406 aaKnown RBP15.62■□□□□ 0.09
LIME1-209ENST00000494776 CCKBRP32239 447 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 LSSP48449 732 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 PDX1P52945 283 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 EPHA4P54764 986 aa15.62■□□□□ 0.09
LIME1-209ENST00000494776 PTK6Q13882 451 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms