RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 BNIP3LO60238 219 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 DNAJC8O75937 253 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 ATP5HO75947 161 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 RECQL5O94762 991 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 CDK14O94921 469 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 UBOX5O94941 541 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 UNC5CO95185 931 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 MATN4O95460 622 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SLC4A1P02730 911 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 EPHX1P07099 455 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 OR56A5P0C7T3 313 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ELFN1P0C7U0 828 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 MPC1LP0DKB6 136 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 NEFHP12036 1026 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CHRM3P20309 590 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SERPINB3P29508 390 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ADSLP30566 484 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 NTSR1P30989 418 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SCTRP47872 440 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 MRPL19P49406 292 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 ALDH18A1P54886 795 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 AQP5P55064 265 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 RPS14P62263 151 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 SEMG2Q02383 582 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ZBTB16Q05516 673 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ACTN3Q08043 901 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 CNTN1Q12860 1018 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CCINQ13939 588 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 TGFBIQ15582 683 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CST6Q15828 149 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 BCL7AQ4VC05 210 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ACSBG2Q5FVE4 666 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 PTRHD1Q6GMV3 140 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 ADAMTSL4Q6UY14 1074 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CCDC121Q6ZUS5 278 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CHSY3Q70JA7 882 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ADAMTSL2Q86TH1 951 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 MTDHQ86UE4 582 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 MMAAQ8IVH4 418 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 HOMEZQ8IX15 550 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 KLHDC8AQ8IYD2 350 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CPNE9Q8IYJ1 553 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 AADATQ8N5Z0 425 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ZBTB2Q8N680 514 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CPSF7Q8N684 471 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 ZNF513Q8N8E2 541 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 IL17RCQ8NAC3 791 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 FBXO15Q8NCQ5 510 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 ST13P5Q8NFI4 369 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 OR2T3Q8NH03 318 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 MAPK15Q8TD08 544 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 PPP4R1Q8TF05 950 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ZNF483Q8TF39 744 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 UBTD2Q8WUN7 234 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 DLG3Q92796 817 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SLC7A6OSQ96CW6 309 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 MOCOSQ96EN8 888 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 PTCD3Q96EY7 689 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 FAR2Q96K12 515 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 EBF4Q9BQW3 602 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 TUBB6Q9BUF5 446 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CCDC28BQ9BUN5 200 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 RIOK2Q9BVS4 552 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 PHF7Q9BWX1 381 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 SPATA16Q9BXB7 569 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 C1QTNF2Q9BXJ5 285 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SLC12A9Q9BXP2 914 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 COG4Q9H9E3 785 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 TNFRSF12AQ9NP84 129 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CACNA2D2Q9NY47 1150 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 HEY2Q9UBP5 337 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 DCTN4Q9UJW0 460 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 ZNF225Q9UK10 706 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SCML1Q9UN30 329 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 GPR34Q9UPC5 381 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 APOBEC2Q9Y235 224 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 OARD1Q9Y530 152 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SZT2Q5T011 3432 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 A0A0G2JND7 137 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 PRR19A6NJB7 356 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 UBXN8O00124 270 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 E2F3O00716 465 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 CHUKO15111 745 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 SLC22A2O15244 555 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 TAPBPO15533 448 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 HNRNPCL1O60812 293 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 CCDC22O60826 627 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 SMIM24O75264 130 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 EGFP01133 1207 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 HOXC4P09017 264 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 ENO2P09104 434 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 C6P13671 934 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 AOC1P19801 751 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 CCR10P46092 362 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 SOX9P48436 509 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 PRLHRP49683 370 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms