RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LRRC61Q9BV99 259 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 CLPBQ9H078 707 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 NHEJ1Q9H9Q4 299 aaPredicted RBP8.08□□□□□ -1.12
RIF1-211ENST00000494333 USP29Q9HBJ7 922 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 NT5MQ9NPB1 228 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 CATSPERZQ9NTU4 200 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 ABHD10Q9NUJ1 306 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 DKK4Q9UBT3 224 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 CBLCQ9ULV8 474 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 U3KQA8 63 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 SPEGQ15772 3267 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 CHD5Q8TDI0 1954 aa8.08□□□□□ -1.12
RIF1-211ENST00000494333 A0A1W2PQ67 120 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 TCRBV5S2A0A599 114 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 EME2A4GXA9 379 aaPredicted RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 LMO7DNF2Z398 122 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 HTRA2O43464 458 aaPredicted RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 MFSD11O43934 449 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 SOCS5O75159 536 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 TSPAN15O95858 294 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 TNFP01375 233 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 GP1BAP07359 652 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 KRT7P08729 469 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 CCNCP24863 283 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 GARSP41250 739 aaKnown RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 SRP54P61011 504 aaKnown RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 TRAF2Q12933 501 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 MTM1Q13496 603 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 NFATC4Q14934 902 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 PAFAH1B3Q15102 231 aaKnown RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 PTPRRQ15256 657 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 ELOCQ15369 112 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 ALG11Q2TAA5 492 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 ARMC12Q5T9G4 340 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 DENND2CQ68D51 928 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 NCBP2-AS2Q69YL0 99 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 GUSBP11Q6P575 273 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 DPPA4Q7L190 304 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.07□□□□□ -1.12
RIF1-211ENST00000494333 TEX26Q8N6G2 289 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 DCBLD1Q8N8Z6 715 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 UHMK1Q8TAS1 419 aaKnown RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 IFI44Q8TCB0 444 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 MAPK15Q8TD08 544 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 NXPE2Q96DL1 559 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 WDR92Q96MX6 357 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 SEMA3CQ99985 751 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 ZNF670Q9BS34 389 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 SPTLC3Q9NUV7 552 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 RBM22Q9NW64 420 aaKnown RBP eCLIP8.07□□□□□ -1.12
RIF1-211ENST00000494333 NCKIPSDQ9NZQ3 722 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 MYOTQ9UBF9 498 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 B4GALT6Q9UBX8 382 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 KLQ9UEF7 1012 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 LCMT1Q9UIC8 334 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 PHTF1Q9UMS5 762 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 COL5A1P20908 1838 aaPredicted RBP8.07□□□□□ -1.12
RIF1-211ENST00000494333 PLXNB3Q9ULL4 1909 aa8.07□□□□□ -1.12
RIF1-211ENST00000494333 CEP295Q9C0D2 2601 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 CCDC66A2RUB6 948 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TMEM202A6NGA9 273 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 AKR1B15C9JRZ8 316 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 CACNB4O00305 520 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 MATN3O15232 486 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 MFAP3LO75121 409 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 DNAJC8O75937 253 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 PGLSO95336 258 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 PDHA1P08559 390 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 ALPIP09923 528 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 CYP2A6P11509 494 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 CTPS1P17812 591 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 GM2AP17900 193 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TGM2P21980 687 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 KDELR1P24390 212 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 NFKBIAP25963 317 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TRIM23P36406 574 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 MC3RP41968 323 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 GALNT2Q10471 571 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 SLC10A2Q12908 348 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 ARHGEF7Q14155 803 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 RTP5Q14D33 572 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 CNGA3Q16281 694 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 KCTD16Q68DU8 428 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 TIGD7Q6NT04 549 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 ESRP1Q6NXG1 681 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 PNCKQ6P2M8 343 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 ABHD17CQ6PCB6 329 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 CRTC1Q6UUV9 634 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 EFL1Q7Z2Z2 1120 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 RBM12BQ8IXT5 1001 aaKnown RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 SLC35F3Q8IY50 421 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 NDUFAF2Q8N183 169 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 FSTL5Q8N475 847 aaPredicted RBP8.06□□□□□ -1.12
RIF1-211ENST00000494333 PQLC3Q8N755 202 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 CCNYQ8ND76 341 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 OR56A4Q8NGH8 313 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 PHOSPHO1Q8TCT1 267 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 PIH1D2Q8WWB5 315 aa8.06□□□□□ -1.12
RIF1-211ENST00000494333 RAPGEF5Q92565 580 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms