RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CSF3RQ99062 836 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ACOX2Q99424 681 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 LRRC1Q9BTT6 524 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 KIFC3Q9BVG8 833 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 KLHL4Q9C0H6 718 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 TMEM39BQ9GZU3 492 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 GRPEL1Q9HAV7 217 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 XAB2Q9HCS7 855 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 MMP25Q9NPA2 562 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 NOX4Q9NPH5 578 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ACSS1Q9NUB1 689 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 STK26Q9P289 416 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 STK39Q9UEW8 545 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CNOT8Q9UFF9 292 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 KCNG2Q9UJ96 466 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 PPIEQ9UNP9 301 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 TRBC2A0A5B9 178 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 EIF4E1BA6NMX2 242 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MAP2K7O14733 419 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PSMA7O14818 248 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CLIC2O15247 247 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SLC7A4O43246 635 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 WDR1O75083 606 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 JRKO75564 520 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF432O94892 652 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CAMTA2O94983 1202 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CLDN14O95500 239 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 GGPS1O95749 300 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 EGFP01133 1207 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 IGKV3-20P01619 116 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TPOP07202 933 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TUBBP07437 444 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PRSS1P07477 247 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 LINC00271P0C7V0 271 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PLA2G2AP14555 144 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TRIM21P19474 475 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 KCNA5P22460 613 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SP100P23497 879 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CALRP27797 417 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 GP5P40197 560 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MMP14P50281 582 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PPARDQ03181 441 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 EEF1A2Q05639 463 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF155Q12901 538 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 IKQ13123 557 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ALCAMQ13740 583 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SNTB1Q13884 538 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF234Q14588 700 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PNLIPRP3Q17RR3 467 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CDONQ4KMG0 1287 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ODF2Q5BJF6 829 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PAPPA-AS1Q5QFB9 102 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CST9LP1Q5W188 147 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 KIAA0930Q6ICG6 404 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 DUS1LQ6P1R4 473 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 RBPMS2Q6ZRY4 209 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MFSD6Q6ZSS7 791 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PLPPR4Q7Z2D5 763 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 RBM23Q86U06 439 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 METTL23Q86XA0 190 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 IQCA1Q86XH1 822 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 FOXRED2Q8IWF2 684 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CHCHD4Q8N4Q1 142 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 XXYLT1Q8NBI6 393 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF114Q8NC26 417 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MSANTD4Q8NCY6 345 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 DMBX1Q8NFW5 382 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 GOT1L1Q8NHS2 421 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TMEM255BQ8WV15 326 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 RND1Q92730 232 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ZKSCAN4Q969J2 545 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TAAR8Q969N4 342 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 VPS33AQ96AX1 596 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ORAI1Q96D31 301 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TMCO6Q96DC7 493 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SCMH1Q96GD3 660 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PPP1R13BQ96KQ4 1090 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SPAG5Q96R06 1193 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MTERF1Q99551 399 aaKnown RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SEPT5Q99719 369 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 SYT17Q9BSW7 474 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 IL25Q9H293 177 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 KCNN2Q9H2S1 579 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 HRH4Q9H3N8 390 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PLK3Q9H4B4 646 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 DENND2DQ9H6A0 471 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MAGIXQ9H6Y5 334 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TRPV4Q9HBA0 871 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PFDN4Q9NQP4 134 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 CWC25Q9NXE8 425 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-207ENST00000494185 COPG2Q9UBF2 871 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 MTRRQ9UBK8 725 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 OR14J1Q9UGF5 321 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TINAGQ9UJW2 476 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 OSGIN1Q9UJX0 560 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 ANAPC5Q9UJX4 755 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 FBXL2Q9UKC9 423 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 NENFQ9UMX5 172 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 TCF19Q9Y242 345 aa2.33□□□□□ -2.04
LMNB1-207ENST00000494185 PTRH2Q9Y3E5 179 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms