RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TMEM115Q12893 351 aaPredicted RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 OLIG2Q13516 323 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 DCTN2Q13561 401 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 KRT32Q14532 448 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 KIR2DS3Q14952 304 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 KRTCAP3Q53RY4 240 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 ARHGEF16Q5VV41 709 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 HAUS3Q68CZ6 603 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 TMEM116Q8NCL8 245 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 RBM15BQ8NDT2 890 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 KCNG4Q8TDN1 519 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 FAM149B1Q96BN6 582 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 INTS12Q96CB8 462 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 ITPAQ9BY32 194 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 ECHDC1Q9NTX5 307 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 TBC1D22BQ9NU19 505 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 BLOC1S4Q9NUP1 217 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 ACAD8Q9UKU7 415 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 AAR2Q9Y312 384 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 PYGO1Q9Y3Y4 419 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 TTC36A6NLP5 189 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 PTP4A3O75365 173 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 PDE9AO76083 593 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 CCNDBP1O95273 360 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 MLYCDO95822 493 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 TM4SF1P30408 202 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 MAPK4P31152 587 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 FASLGP48023 281 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 PIP4K2AP48426 406 aaPredicted RBP3.74□□□□□ -1.81
SMC4-223ENST00000493695 NR2C2P49116 596 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 CTCFP49711 727 aaPredicted RBP3.74□□□□□ -1.81
SMC4-223ENST00000493695 MAD2L1Q13257 205 aaPredicted RBP3.74□□□□□ -1.81
SMC4-223ENST00000493695 EIF4A2Q14240 407 aaKnown RBP3.74□□□□□ -1.81
SMC4-223ENST00000493695 FGFBP1Q14512 234 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 GTDC1Q4AE62 458 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 SOWAHCQ53LP3 525 aaPredicted RBP3.74□□□□□ -1.81
SMC4-223ENST00000493695 CCDC30Q5VVM6 783 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 MZT2BQ6NZ67 158 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 MFSD6Q6ZSS7 791 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 CACNA2D4Q7Z3S7 1137 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 PPP1R13BQ96KQ4 1090 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 CHCHD6Q9BRQ6 235 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 SLC28A3Q9HAS3 691 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 ATAD3AQ9NVI7 634 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 C2orf42Q9NWW7 574 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 HAO1Q9UJM8 370 aa3.74□□□□□ -1.81
SMC4-223ENST00000493695 FLT1P17948 1338 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 LIPT2A6NK58 231 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 LRRC53A6NM62 1247 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 TYMPP19971 482 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 CASP2P42575 452 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 SLC6A12P48065 614 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 SETQ01105 290 aaPredicted RBP3.73□□□□□ -1.81
SMC4-223ENST00000493695 RUNX1T1Q06455 604 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 DECR1Q16698 335 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 COL28A1Q2UY09 1125 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 USP41Q3LFD5 358 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 CXorf66Q5JRM2 361 aaPredicted RBP3.73□□□□□ -1.81
SMC4-223ENST00000493695 NCEH1Q6PIU2 408 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 CYP20A1Q6UW02 462 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 C4orf50Q6ZRC1 276 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 PCGF5Q86SE9 256 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 CNTROBQ8N137 903 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 AMER3Q8N944 861 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 MRGPRDQ8TDS7 321 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 TMEM143Q96AN5 459 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 MMABQ96EY8 250 aaPredicted RBP3.73□□□□□ -1.81
SMC4-223ENST00000493695 GMPPAQ96IJ6 420 aaPredicted RBP3.73□□□□□ -1.81
SMC4-223ENST00000493695 SMC6Q96SB8 1091 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 RHNO1Q9BSD3 238 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 SLC6A13Q9NSD5 602 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 DIAPH3Q9NSV4 1193 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 MKLN1Q9UL63 735 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 KCNE2Q9Y6J6 123 aa3.73□□□□□ -1.81
SMC4-223ENST00000493695 COL5A2P05997 1499 aaPredicted RBP3.73□□□□□ -1.81
SMC4-223ENST00000493695 AGRNO00468 2067 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 H0YIN7 160 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 ANKRD28O15084 1053 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 EIF2S1P05198 315 aaKnown RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 IGHV4-38-2P0DP08 117 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 EPHA2P29317 976 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 PBX3P40426 434 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 RARSP54136 660 aaKnown RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 CSTF3Q12996 717 aaKnown RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 MAMLD1Q13495 774 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 DRAP1Q14919 205 aaPredicted RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 DPCR1Q3MIW9 517 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 XKR6Q5GH73 641 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 C6orf141Q5SZD1 244 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 PWWP2BQ6NUJ5 590 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 ZNF774Q6NX45 483 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 TRIM65Q6PJ69 517 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 CPLX4Q7Z7G2 160 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 ARHGAP12Q8IWW6 846 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 UTP15Q8TED0 518 aaKnown RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 USP6NLQ92738 828 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 ARHGEF2Q92974 986 aaKnown RBP3.72□□□□□ -1.81
SMC4-223ENST00000493695 GTF3C6Q969F1 213 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 ZNF414Q96IQ9 312 aa3.72□□□□□ -1.81
SMC4-223ENST00000493695 TMEM47Q9BQJ4 181 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms