RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 DNAJB9Q9UBS3 223 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 MAGEL2Q9UJ55 1249 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 LEF1Q9UJU2 399 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 CITO14578 2027 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 CCL22O00626 93 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 HAT1O14929 419 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 AREL1O15033 823 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 PMPCBO75439 489 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 PRKD3O94806 890 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 UBL4AP11441 157 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 LMO2P25791 158 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 POLR2JP52435 117 aaKnown RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 MBTD1Q05BQ5 628 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 AAK1Q2M2I8 961 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 HECTD2Q5U5R9 776 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 DENND5AQ6IQ26 1287 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF544Q6NX49 715 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 PDZD4Q76G19 769 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 HID1Q8IV36 788 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 OR10Q1Q8NGQ4 319 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 ST6GAL2Q96JF0 529 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 ACOT13Q9NPJ3 140 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 SEMA4BQ9NPR2 832 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 ITM2BQ9Y287 266 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 METTL15A6NJ78 407 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 AGRPO00253 132 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 SLC4A1P02730 911 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 FGF4P08620 206 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 ADRA1BP35368 520 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 FCGRTP55899 365 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 GPLD1P80108 840 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 STXBP2Q15833 593 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 SOWAHCQ53LP3 525 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 HFE2Q6ZVN8 426 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 TTC39CQ8N584 583 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 TP53I13Q8NBR0 393 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 SLC2A14Q8TDB8 520 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 DUSP21Q9H596 190 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 RNF167Q9H6Y7 350 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 COMMD8Q9NX08 183 aa11.57□□□□□ -0.56
HDAC4-210ENST00000493582 AGO1Q9UL18 857 aaKnown RBP11.57□□□□□ -0.56
HDAC4-210ENST00000493582 COL2A1P02458 1487 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 ZBTB42B2RXF5 422 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 TEX28O15482 410 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 CYP11A1P05108 521 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 CYP2C8P10632 490 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 TGFBR2P37173 567 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 KANK2Q63ZY3 851 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 AGMOQ6ZNB7 445 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 CHAC2Q8WUX2 184 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 UBE2FQ969M7 185 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 PABPC5Q96DU9 382 aaKnown RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF419Q96HQ0 510 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 REXO5Q96IC2 774 aaKnown RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 COQ7Q99807 217 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 ASB7Q9H672 318 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 TMEFF2Q9UIK5 374 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 CRYL1Q9Y2S2 319 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 EVPLLA8MZ36 301 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 APOA1P02647 267 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 PRDX3P30048 256 aaKnown RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 RYKP34925 604 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 LIPAP38571 399 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 DCTP40126 519 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF135P52742 658 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 RABGGTBP53611 331 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 FXNQ16595 210 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 BCL7AQ4VC05 210 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 PNCKQ6P2M8 343 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 UBQLNLQ8IYU4 475 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 ISG20Q96AZ6 181 aaKnown RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 NEDD4LQ96PU5 975 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 ACOX2Q99424 681 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 WBP11Q9Y2W2 641 aaKnown RBP11.56□□□□□ -0.56
HDAC4-210ENST00000493582 TPRKBQ9Y3C4 175 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
HDAC4-210ENST00000493582 SCN1AP35498 2009 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 AIREO43918 545 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 CRCPO75575 148 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SEMA3DO95025 777 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 BMP1P13497 986 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 PLEKHG6Q3KR16 790 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 FAAH2Q6GMR7 532 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 JPH3Q8WXH2 748 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 NUAK2Q9H093 628 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 ACTR8Q9H981 624 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 RPRD1BQ9NQG5 326 aaKnown RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 POLR3BQ9NW08 1133 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 ADGRE2Q9UHX3 823 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 USP21Q9UK80 565 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 PCDHGB6Q9Y5F9 930 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 MEN1O00255 615 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms