RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ITGB6P18564 788 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 PIK3R1P27986 724 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 MMP12P39900 470 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 B4GALNT1Q00973 533 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 MESP2Q0VG99 397 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 RALGDSQ12967 914 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 CDC16Q13042 620 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 RUNX3Q13761 415 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPN7-216ENST00000492977 ACSBG2Q5FVE4 666 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 C9orf64Q5T6V5 341 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 KANK2Q63ZY3 851 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 CLEC6AQ6EIG7 209 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 NRSN1Q8IZ57 195 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 TRAM1L1Q8N609 369 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 ZNF366Q8N895 744 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 TERB1Q8NA31 727 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 OR56A4Q8NGH8 313 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 FBXO27Q8NI29 283 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 AGAP11Q8TF27 550 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 OR8D1Q8WZ84 308 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 DCUN1D1Q96GG9 259 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 CATSPER2Q96P56 530 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 RTKNQ9BST9 563 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 ZSCAN5AQ9BUG6 496 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 ZBTB26Q9HCK0 441 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 TMPRSS11EQ9UL52 423 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 OARD1Q9Y530 152 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 CFAP99D6REC4 459 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 H0Y858 1186 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 RFXAPO00287 272 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 PPP6CO00743 305 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 FFAR2O15552 330 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 TM7SF2O76062 418 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 AP2A2O94973 939 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 ENO3P13929 434 aaPredicted RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 ITGB7P26010 798 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 AGTR2P50052 363 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 ELAVL3Q14576 367 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 ZRSR2Q15696 482 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 PPP1R3AQ16821 1122 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 HENMT1Q5T8I9 393 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 TMEM198Q66K66 360 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 LIPIQ6XZB0 460 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 CYHR1Q6ZMK1 362 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 Q6ZVL8 140 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 PARS2Q7L3T8 475 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 EFL1Q7Z2Z2 1120 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 TECPR1Q7Z6L1 1165 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 YAF2Q8IY57 180 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 PDPRQ8NCN5 879 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 C19orf60Q96EN9 201 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 GDF15Q99988 308 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 HGH1Q9BTY7 390 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 NUSAP1Q9BXS6 441 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 TMEM245Q9H330 911 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 RDH14Q9HBH5 336 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 SEMA4BQ9NPR2 832 aaPredicted RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 CD84Q9UIB8 345 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 PPM1HQ9ULR3 514 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 DNAJC15Q9Y5T4 150 aa13.83□□□□□ -0.19
PTPN7-216ENST00000492977 COPG1Q9Y678 874 aaKnown RBP13.83□□□□□ -0.19
PTPN7-216ENST00000492977 CHD9Q3L8U1 2897 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 PLXNA2O75051 1894 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 KIAA1549LQ6ZVL6 1849 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 LOC100653049A0A140TA62 436 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 TBC1D3BA6NDS4 549 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 KPNA3O00505 521 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 E2F3O00716 465 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 GIPC1O14908 333 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 KPNA5O15131 536 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 UBDO15205 165 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 LINC01565O15544 149 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 VPS4BO75351 444 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 GPC4O75487 556 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 KRT34O76011 436 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 ESRRBO95718 433 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 ELFN1P0C7U0 828 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 CCND1P24385 295 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 AOAHP28039 575 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 ETV3P41162 512 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 EIF2DP41214 584 aaKnown RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 PKNOX1P55347 436 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 CYLC2Q14093 348 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 ZNF234Q14588 700 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 ZNF284Q2VY69 593 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 CDKL4Q5MAI5 379 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 METTL2BQ6P1Q9 378 aaKnown RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 LARP4Q71RC2 724 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 SCUBE1Q8IWY4 988 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 NAT14Q8WUY8 206 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 SCAMP4Q969E2 229 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 DENND2DQ9H6A0 471 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 PFDN4Q9NQP4 134 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 UTP6Q9NYH9 597 aaKnown RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 CDH22Q9UJ99 828 aa13.83□□□□□ -0.2
PTPN7-216ENST00000492977 PTBP2Q9UKA9 531 aaKnown RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 SARDHQ9UL12 918 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms