RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 OR2L2Q8NH16 312 aa13.73□□□□□ -0.21
CCM2-217ENST00000492883 SLC37A2Q8TED4 501 aa13.73□□□□□ -0.21
CCM2-217ENST00000492883 LINC00615Q96LM1 132 aaPredicted RBP13.73□□□□□ -0.21
CCM2-217ENST00000492883 EBNA1BP2Q99848 306 aaKnown RBP13.73□□□□□ -0.21
CCM2-217ENST00000492883 CCM2Q9BSQ5 444 aa13.73□□□□□ -0.21
CCM2-217ENST00000492883 STN1Q9H668 368 aaKnown RBP13.73□□□□□ -0.21
CCM2-217ENST00000492883 SYNDIG1Q9H7V2 258 aa13.73□□□□□ -0.21
CCM2-217ENST00000492883 WHRNQ9P202 907 aa13.73□□□□□ -0.21
CCM2-217ENST00000492883 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
CCM2-217ENST00000492883 PRSS21Q9Y6M0 314 aa13.73□□□□□ -0.21
CCM2-217ENST00000492883 ZNF292O60281 2723 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 KIR2DS5A0A0G2JLQ3 304 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 A0A0G2JNG1 304 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 KIR2DS3K7RE56 304 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ZW10O43264 779 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 TTC4O95801 387 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 TOP3BO95985 862 aaKnown RBP13.72□□□□□ -0.21
CCM2-217ENST00000492883 JUPP14923 745 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 PNLIPP16233 465 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ARNTP27540 789 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ALDH4A1P30038 563 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 HALP42357 657 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ARCN1P48444 511 aaKnown RBP13.72□□□□□ -0.21
CCM2-217ENST00000492883 KIR2DS5Q14953 304 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 METRNLQ641Q3 311 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 DUPD1Q68J44 220 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ZNF449Q6P9G9 518 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ABRAXAS1Q6UWZ7 409 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 WASH2PQ6VEQ5 465 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 PACS1Q6VY07 963 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 FAM83HQ6ZRV2 1179 aaPredicted RBP13.72□□□□□ -0.21
CCM2-217ENST00000492883 TRIM48Q8IWZ4 208 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 CEP112Q8N8E3 955 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 NAT9Q9BTE0 207 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 LRRC1Q9BTT6 524 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 WASH6PQ9NQA3 447 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 C20orf96Q9NUD7 363 aaPredicted RBP13.72□□□□□ -0.21
CCM2-217ENST00000492883 FAM169AQ9Y6X4 670 aa13.72□□□□□ -0.21
CCM2-217ENST00000492883 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 C17orf113A0A1B0GUU1 675 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 A6NCN8 305 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 PRMT5O14744 637 aaPredicted RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 PPM1DO15297 605 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 FTH1P02794 183 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SPINK2P20155 84 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 ELK3P41970 407 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 PPM1FP49593 454 aaPredicted RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 PLTPP55058 493 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 CLDN6P56747 220 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 CCL7P80098 99 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 INSM1Q01101 510 aaPredicted RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 SLC7A5Q01650 507 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 HHEXQ03014 270 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 PDIA2Q13087 525 aaKnown RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 LONRF1Q17RB8 773 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 HES3Q5TGS1 186 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 AGAP9Q5VTM2 703 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 TMPRSS12Q86WS5 348 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 CCNJLQ8IV13 435 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 MMGT1Q8N4V1 131 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 AVL9Q8NBF6 648 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCM2-217ENST00000492883 GPR150Q8NGU9 434 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 HM13Q8TCT9 377 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SH3KBP1Q96B97 665 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 LRRC39Q96DD0 335 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 CFAP36Q96G28 342 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 TCF12Q99081 682 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SLC38A3Q99624 504 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SARS2Q9NP81 518 aaKnown RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 IL1RAPL1Q9NZN1 696 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 CPNE7Q9UBL6 633 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 ZC3H7BQ9UGR2 993 aaKnown RBP13.71□□□□□ -0.21
CCM2-217ENST00000492883 RABGEF1Q9UJ41 708 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 ACSL5Q9ULC5 683 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 PSMD13Q9UNM6 376 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 CHMP2BQ9UQN3 213 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 WDR37Q9Y2I8 494 aa13.71□□□□□ -0.21
CCM2-217ENST00000492883 ASCC3Q8N3C0 2202 aaKnown RBP13.71□□□□□ -0.22
CCM2-217ENST00000492883 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 FAM149AA5PLN7 773 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 PRR19A6NJB7 356 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 TP73O15350 636 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 MT-CO3P00414 261 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 VIPP01282 170 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 RPLP0P05388 317 aaKnown RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 GSTM1P09488 218 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 BRAFP15056 766 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 ITGB6P18564 788 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 OGNP20774 298 aaKnown RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 FASLGP48023 281 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 OR1D5P58170 312 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 FOXK2Q01167 660 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 GSTM4Q03013 218 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms