RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 BCCIPQ9P287 314 aaKnown RBP eCLIP3.85□□□□□ -1.79
CLK1-213ENST00000492793 MARCH4Q9P2E8 410 aaPredicted RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 KLHL9Q9P2J3 617 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 RALYQ9UKM9 306 aaKnown RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 TNFRSF18Q9Y5U5 241 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 PRAG1Q86YV5 1406 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 IGHV4OR15-8A0A075B7B6 117 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 DENND3A2RUS2 1198 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 LILRA5A6NI73 299 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 MAGEB17A8MXT2 336 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 EIF3DO15371 548 aaKnown RBP eCLIP3.84□□□□□ -1.79
CLK1-213ENST00000492793 SLC28A2O43868 658 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 PRAMEF11O60813 436 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 ADRB2P07550 413 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 TGFB3P10600 412 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 GABRA5P31644 462 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 CCKBRP32239 447 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 BRWD1-AS2P59051 145 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 EEF1A1P68104 462 aaKnown RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 KIF5AQ12840 1032 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 ZBTB17Q13105 803 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 BAATQ14032 418 aaPredicted RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 ZNF234Q14588 700 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 C9orf152Q5JTZ5 239 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 EEF1A1P5Q5VTE0 462 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 ZNF324BQ6AW86 544 aaPredicted RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 FAM171BQ6P995 826 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 PRSS57Q6UWY2 283 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 ZNF704Q6ZNC4 412 aaPredicted RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 PLEKHM3Q6ZWE6 761 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 C16orf82Q7Z2V1 217 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 ARMC9Q7Z3E5 817 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 ADGRA1Q86SQ6 560 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 SLC9B2Q86UD5 537 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 SATL1Q86VE3 508 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 OR52I2Q8NH67 350 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 PTPMT1Q8WUK0 201 aaPredicted RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 TMEM255BQ8WV15 326 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 TEKT4Q8WW24 435 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 LINGO1Q96FE5 620 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 MARK4Q96L34 752 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 DGAT2Q96PD7 388 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 DUX5Q96PT3 197 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 FNDC11Q9BVV2 318 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 GOLPH3LQ9H4A5 285 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 RETREG1Q9H6L5 497 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 GAREM1Q9H706 876 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 TRPC7Q9HCX4 862 aa3.84□□□□□ -1.79
CLK1-213ENST00000492793 TRMT1Q9NXH9 659 aaKnown RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 NFKBIL1Q9UBC1 381 aaPredicted RBP3.84□□□□□ -1.79
CLK1-213ENST00000492793 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 CLEC18AA5D8T8 446 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 C4orf47A7E2U8 309 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 C15orf62A8K5M9 175 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 ANKRD66B4E2M5 251 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 ZNF587BE7ETH6 402 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 DVL1O14640 695 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 BUD23O43709 281 aaKnown RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 SSX4O60224 188 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 WDR1O75083 606 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 GGPS1O95749 300 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 FAM106CPP0CH98 169 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 IL11P20809 199 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 TKTP29401 623 aaKnown RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 TERF1P54274 439 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 DVL1P1P54792 670 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 CDH13P55290 713 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 SIRPAP78324 504 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 EEF1A2Q05639 463 aaKnown RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 ASIC2Q16515 512 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 ASPRV1Q53RT3 343 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 C9orf57Q5W0N0 161 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 TMEM173Q86WV6 379 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 CLEC18CQ8NCF0 446 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 RBM15BQ8NDT2 890 aaKnown RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 RDM1Q8NG50 284 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 SPATA20Q8TB22 786 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 MTERF3Q96E29 417 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 RADILQ96JH8 1075 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 PRMT6Q96LA8 375 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 TTC14Q96N46 770 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 IL17FQ96PD4 163 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 MEIS3Q99687 375 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 POLR3CQ9BUI4 534 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 RABEP2Q9H5N1 569 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 MIOSQ9NXC5 875 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 SELENONQ9NZV5 590 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 CFDP1Q9UEE9 299 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 TMEM184BQ9Y519 407 aaPredicted RBP3.83□□□□□ -1.8
CLK1-213ENST00000492793 YIPF1Q9Y548 306 aa3.83□□□□□ -1.8
CLK1-213ENST00000492793 A0A1W2PP11 408 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 OR2M5A3KFT3 312 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 ACOT8O14734 319 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 LDB3O75112 727 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 PSMD10O75832 226 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 TRUB2O95900 331 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms