RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 LIMK2P53671 638 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 TERF1P54274 439 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 NFKB2Q00653 900 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 SEMA5AQ13591 1074 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 GALNT3Q14435 633 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 TRIP13Q15645 432 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 SIRPB2Q5JXA9 342 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 ZNF648Q5T619 568 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 ZNF765Q7L2R6 523 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 TMC3Q7Z5M5 1100 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 CTAGE6Q86UF2 777 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 CTAGE4Q8IX94 777 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 TAB3Q8N5C8 712 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 EXTL1Q92935 676 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 EID2BQ96D98 161 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 SGF29Q96ES7 293 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 KRT12Q99456 494 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 DPYSL5Q9BPU6 564 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 STN1Q9H668 368 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 ARFGAP3Q9NP61 516 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 EIF2B3Q9NR50 452 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 OCIAD1Q9NX40 245 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 SMARCAL1Q9NZC9 954 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 BFARQ9NZS9 450 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 KCNK6Q9Y257 313 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 UTP11Q9Y3A2 253 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 PCDHB11Q9Y5F2 797 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 MRFAP1Q9Y605 127 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 BSNQ9UPA5 3926 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 SUN1O94901 812 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 LPOP22079 712 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 CD82P27701 267 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 ADRA1AP35348 466 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 HADHAP40939 763 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 VPS41P49754 854 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 TAF1AQ15573 450 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 MANEAQ5SRI9 462 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 HENMT1Q5T8I9 393 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 KCTD11Q693B1 232 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 TTC27Q6P3X3 843 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 XKR5Q6UX68 686 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 NLRP9Q7RTR0 991 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 GALNT13Q8IUC8 556 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 SFRP1Q8N474 314 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 BLOC1S5Q8TDH9 187 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 TRIB3Q96RU7 358 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 FAM83DQ9H4H8 585 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 KCNK4Q9NYG8 393 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 TBC1D29Q9UFV1 150 aa10.87□□□□□ -0.67
TMEM39A-211ENST00000491685 A6NCN8 305 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 EFCAB8A8MWE9 144 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 HGSO14964 777 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ASMTLO95671 621 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 SLC4A1P02730 911 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 FAM87AP0C7U9 286 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 PIRTP0C851 137 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ACP5P13686 325 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 TPSB2P20231 275 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ADRA1DP25100 572 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 HMGCLP35914 325 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 GPR3P46089 330 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 FASLGP48023 281 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 SPINT3P49223 89 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 CALCOCO2Q13137 446 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 PTK6Q13882 451 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 LRP8Q14114 963 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 SPARCL1Q14515 664 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 TPSAB1Q15661 275 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 SKIDA1Q1XH10 827 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 GLE1Q53GS7 698 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ARMC3Q5W041 872 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ALS2CLQ60I27 953 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 LRRC8BQ6P9F7 803 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 CHST15Q7LFX5 561 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 LYSMD3Q7Z3D4 306 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 GLT6D1Q7Z4J2 308 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 PRUNE1Q86TP1 453 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 KLHDC8BQ8IXV7 354 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 PPIL6Q8IXY8 311 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 BMPERQ8N8U9 685 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ZSCAN1Q8NBB4 408 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 AVL9Q8NBF6 648 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 OR4D9Q8NGE8 314 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ART4Q93070 314 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 TTC1Q99614 292 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 C19orf43Q9BQ61 176 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 APOL2Q9BQE5 337 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 B3GNT4Q9C0J1 378 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ZNHIT2Q9UHR6 403 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 ZNF711Q9Y462 761 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 B3GALT1Q9Y5Z6 326 aa10.86□□□□□ -0.67
TMEM39A-211ENST00000491685 HEATR9A2RTY3 570 aa10.85□□□□□ -0.67
TMEM39A-211ENST00000491685 SDR42E2A6NKP2 422 aa10.85□□□□□ -0.67
TMEM39A-211ENST00000491685 EFCAB7A8K855 629 aa10.85□□□□□ -0.67
TMEM39A-211ENST00000491685 A8MU76 341 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms