RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NLGN4YQ8NFZ3 816 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 OR4K2Q8NGD2 314 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 ZFPM2Q8WW38 1151 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 HES6Q96HZ4 224 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 TBC1D10AQ9BXI6 508 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 LRRC40Q9H9A6 602 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A7Q9HAW7 530 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A10Q9HAW8 530 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A8Q9HAW9 530 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 SLC40A1Q9NP59 571 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 OCIAD1Q9NX40 245 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 SLC23A2Q9UGH3 650 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 HEBP2Q9Y5Z4 205 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 B3GALT1Q9Y5Z6 326 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 OR2AG2A6NM03 316 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 ZNF891A8MT65 544 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 BUD23O43709 281 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 RAD1O60671 282 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 SRP72O76094 671 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 SLC35G4P0C7Q5 338 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 TYRP1P17643 537 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 PSMB4P28070 264 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 NDUFS1P28331 727 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 STIP1P31948 543 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 LMAN1P49257 510 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 DMPKQ09013 629 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 IL11RAQ14626 422 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 GPR33Q49SQ1 333 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 ANKS6Q68DC2 871 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 LRRC8AQ8IWT6 810 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 RASGEF1AQ8N9B8 481 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 CCDC110Q8TBZ0 833 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 NKD1Q969G9 470 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 C9orf72Q96LT7 481 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 CATSPER2Q96P56 530 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 TGM7Q96PF1 710 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 COPS8Q99627 209 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 CCM2Q9BSQ5 444 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 GPN2Q9H9Y4 310 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 PDE7BQ9NP56 450 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 TMEM9Q9P0T7 183 aa16.26■□□□□ 0.19
PDLIM2-217ENST00000491330 CFAP47Q6ZTR5 3102 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 FREM2Q5SZK8 3169 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ZZEF1O43149 2961 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 MGAT4DA6NG13 374 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 IFRD1O00458 451 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 CCNYL3P0C7X3 344 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 PBLDP30039 288 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 PRKAA1Q13131 559 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 CACHD1Q5VU97 1274 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 VASH2Q86V25 355 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 RASGRP3Q8IV61 690 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ZNF547Q8IVP9 402 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ESX1Q8N693 406 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 JPH3Q8WXH2 748 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 UBXN4Q92575 508 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ALG3Q92685 438 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 APOL2Q9BQE5 337 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 DESI2Q9BSY9 194 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 FAM117AQ9C073 453 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 C10orf88Q9H8K7 445 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 IMP3Q9NV31 184 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ZNF624Q9P2J8 865 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 PCDHB3Q9Y5E6 796 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 PCDHGA4Q9Y5G9 962 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 PCYT1BQ9Y5K3 369 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ARL5AQ9Y689 179 aa16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 ARHGEF17Q96PE2 2063 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-217ENST00000491330 MN1Q10571 1320 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 OR52A4PA6NMU1 304 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 ERI2A8K979 691 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 E7EVH7 732 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 QSOX1O00391 747 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 C9P02748 559 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 MT-ND3P03897 115 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 PRB1P04280 392 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 GSTM1P09488 218 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 PPARGP37231 505 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 CAPZBP47756 277 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 GSTM4Q03013 218 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 GPR18Q14330 331 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 FAM182AQ5T1J6 154 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 DET1Q7L5Y6 550 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 SNX20Q7Z614 316 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 BPHLQ86WA6 291 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 DNAAF3Q8N9W5 541 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 FAM71DQ8N9W8 422 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 TRIM58Q8NG06 486 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 OR2L2Q8NH16 312 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 TTC9Q92623 222 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 CD180Q99467 661 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 CTRCQ99895 268 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 RAB33BQ9H082 229 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 ARNT2Q9HBZ2 717 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 SCHIP1Q9P0W5 487 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 EPHA6Q9UF33 1036 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 UNC13CQ8NB66 2214 aa16.24■□□□□ 0.19
PDLIM2-217ENST00000491330 ATRXP46100 2492 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms