RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CLDN20P56880 219 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 ACVR2BQ13705 512 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 TAF5Q15542 800 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 DCST1Q5T197 706 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 SYCP2LQ5T4T6 812 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 TXNDC8Q6A555 127 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 SIGIRRQ6IA17 410 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 PQLC2Q6ZP29 291 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 BMPERQ8N8U9 685 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 RBM15BQ8NDT2 890 aaKnown RBP3.55□□□□□ -1.84
PHC3-213ENST00000491258 GRHL3Q8TE85 626 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 SLC44A1Q8WWI5 657 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 KLHL29Q96CT2 875 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 ZBTB20Q9HC78 741 aaPredicted RBP3.55□□□□□ -1.84
PHC3-213ENST00000491258 TERF2IPQ9NYB0 399 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 KLHL8Q9P2G9 620 aaPredicted RBP3.55□□□□□ -1.84
PHC3-213ENST00000491258 HSPB7Q9UBY9 170 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 EXOGQ9Y2C4 368 aaKnown RBP3.55□□□□□ -1.84
PHC3-213ENST00000491258 XIRP1Q702N8 1843 aaKnown RBP3.55□□□□□ -1.84
PHC3-213ENST00000491258 SHPRHQ149N8 1683 aa3.55□□□□□ -1.84
PHC3-213ENST00000491258 CRB1P82279 1406 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 KTN1Q86UP2 1357 aaKnown RBP3.54□□□□□ -1.84
PHC3-213ENST00000491258 GOLGA6L10A0A0M3HER8 536 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 HS3ST1O14792 307 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 SEC14L5O43304 696 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 SRSF10O75494 262 aaKnown RBP3.54□□□□□ -1.84
PHC3-213ENST00000491258 PDE9AO76083 593 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 GNAZP19086 355 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 NR2F2P24468 414 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 PAPOLAP51003 745 aaKnown RBP3.54□□□□□ -1.84
PHC3-213ENST00000491258 BMXP51813 675 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 MLLT10P55197 1068 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 MBTD1Q05BQ5 628 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 SLC12A1Q13621 1099 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 ENPP2Q13822 863 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 TUBB8Q3ZCM7 444 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 C18orf63Q68DL7 685 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 SLC22A25Q6T423 547 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 MFSD6Q6ZSS7 791 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 PHF21AQ96BD5 680 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 ABHD8Q96I13 439 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 ZNF300Q96RE9 604 aaPredicted RBP3.54□□□□□ -1.84
PHC3-213ENST00000491258 REEP2Q9BRK0 252 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 ACSS1Q9NUB1 689 aaPredicted RBP3.54□□□□□ -1.84
PHC3-213ENST00000491258 ATAD3AQ9NVI7 634 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 GLI3P10071 1580 aa3.54□□□□□ -1.84
PHC3-213ENST00000491258 BCL9O00512 1426 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 SPHKAPQ2M3C7 1700 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 CAMTA1Q9Y6Y1 1673 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 COL22A1Q8NFW1 1626 aaPredicted RBP3.53□□□□□ -1.84
PHC3-213ENST00000491258 PLA2G4BP0C869 781 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 TYMPP19971 482 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 MCCP23508 829 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 GATA2P23769 480 aaPredicted RBP3.53□□□□□ -1.84
PHC3-213ENST00000491258 CDH15P55291 814 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 TBX2Q13207 712 aaPredicted RBP3.53□□□□□ -1.84
PHC3-213ENST00000491258 SLC15A2Q16348 729 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 DECR1Q16698 335 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 KRTCAP3Q53RY4 240 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 TCTEX1D4Q5JR98 221 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 WDR45BQ5MNZ6 344 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 BHLHB9Q6PI77 547 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 NRROSQ86YC3 692 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 SUGP1Q8IWZ8 645 aaKnown RBP3.53□□□□□ -1.84
PHC3-213ENST00000491258 APBB2Q92870 758 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 PABPC5Q96DU9 382 aaKnown RBP3.53□□□□□ -1.84
PHC3-213ENST00000491258 COG3Q96JB2 828 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 ZSCAN31Q96LW9 406 aaPredicted RBP3.53□□□□□ -1.84
PHC3-213ENST00000491258 TRPC7Q9HCX4 862 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 TP53TG3Q9ULZ0 132 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 RIPOR2Q9Y4F9 1068 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 CEPT1Q9Y6K0 416 aa3.53□□□□□ -1.84
PHC3-213ENST00000491258 NALCNQ8IZF0 1738 aa3.53□□□□□ -1.85
PHC3-213ENST00000491258 TONSLQ96HA7 1378 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 CCDC7Q96M83 1385 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 MAP3K19Q56UN5 1328 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 ADGRB2O60241 1585 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 AGRNO00468 2067 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 PLOD2O00469 737 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 IGHV4-38-2P0DP08 117 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 ACADSP16219 412 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 HOXC9P31274 260 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 RPP30P78346 268 aaKnown RBP3.52□□□□□ -1.85
PHC3-213ENST00000491258 KCNJ10P78508 379 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 FOXD4Q12950 439 aaPredicted RBP3.52□□□□□ -1.85
PHC3-213ENST00000491258 RRS1Q15050 365 aaKnown RBP3.52□□□□□ -1.85
PHC3-213ENST00000491258 MYLK3Q32MK0 819 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 SNAI3Q3KNW1 292 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 ADAMTSL4-AS1Q5T5F5 129 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 ZNF774Q6NX45 483 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 ZNF613Q6PF04 617 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 LONP2Q86WA8 852 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 GMPPAQ96IJ6 420 aaPredicted RBP3.52□□□□□ -1.85
PHC3-213ENST00000491258 AGAP3Q96P47 875 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 H2AFJQ9BTM1 129 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 TMEM181Q9P2C4 612 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 OVOS2A0A0G2JMS6 1433 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 OVOS2A0A0J9YW53 1432 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 OVOS2Q6IE36 1432 aa3.52□□□□□ -1.85
PHC3-213ENST00000491258 A0A1W2PP64 1363 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms