RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 LAYNQ6UX15 382 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 ZNF547Q8IVP9 402 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 OR2M4Q96R27 311 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 TIMM29Q9BSF4 260 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 CCM2Q9BSQ5 444 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 CARS2Q9HA77 564 aaKnown RBP18.34■□□□□ 0.53
MCF2L-230ENST00000491028 CYP4F12Q9HCS2 524 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 LATS2Q9NRM7 1088 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 SPATS2LQ9NUQ6 558 aaKnown RBP18.34■□□□□ 0.53
MCF2L-230ENST00000491028 KLHL42Q9P2K6 505 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 MOSPD1Q9UJG1 213 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 SLC39A10Q9ULF5 831 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 MED16Q9Y2X0 877 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 HCN4Q9Y3Q4 1203 aa18.34■□□□□ 0.53
MCF2L-230ENST00000491028 C17orf113A0A1B0GUU1 675 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 TRIM49D1C9J1S8 452 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 KCNJ13O60928 360 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 TRIM16O95361 564 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 TNFP01375 233 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 FUCA1P04066 466 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 STMN1P16949 149 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 ATP5DP30049 168 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 SKIV2L2P42285 1042 aaKnown RBP18.33■□□□□ 0.52
MCF2L-230ENST00000491028 CDKN2DP55273 166 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 TAS2R39P59534 338 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 LRP8Q14114 963 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 ZKSCAN8Q15776 578 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-230ENST00000491028 LAIR1Q6GTX8 287 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 TIFABQ6ZNK6 161 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 CCDC91Q7Z6B0 441 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 C11orf96Q7Z7L8 435 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 SPATS2Q86XZ4 545 aaKnown RBP18.33■□□□□ 0.52
MCF2L-230ENST00000491028 KRT222Q8N1A0 295 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 ACVR1CQ8NER5 493 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 OR2L2Q8NH16 312 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 HM13Q8TCT9 377 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 LKAAEAR1Q8TD35 194 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 MZB1Q8WU39 189 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 NAT14Q8WUY8 206 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 PGM2Q96G03 612 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 OLFM1Q99784 485 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 ERVMER34-1Q9H9K5 563 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 MRPL40Q9NQ50 206 aaKnown RBP18.33■□□□□ 0.52
MCF2L-230ENST00000491028 ZNHIT2Q9UHR6 403 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 SMG5Q9UPR3 1016 aaKnown RBP18.33■□□□□ 0.52
MCF2L-230ENST00000491028 ANKRD6Q9Y2G4 727 aa18.33■□□□□ 0.52
MCF2L-230ENST00000491028 A0A1B0GVT2 93 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 IQCF5A8MTL0 148 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 RGS16O15492 202 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 POP7O75817 140 aaKnown RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 SASH3O75995 380 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 ALDOAP04075 364 aaKnown RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 MYZAPP0CAP1 466 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 VCLP18206 1134 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 KRT15P19012 456 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 SAT1P21673 171 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 CRABP2P29373 138 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 MAGEA12P43365 314 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 GNPDA1P46926 289 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 CLCN7P51798 805 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 HK3P52790 923 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 RAB10P61026 200 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 PDAP1Q13442 181 aaKnown RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 LPAL2Q16609 132 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 INSCQ1MX18 579 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 TTLL9Q3SXZ7 439 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 PHACTR4Q8IZ21 702 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 BEND7Q8N7W2 519 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 CD200R1Q8TD46 325 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 ELMO1Q92556 727 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 TSACCQ96A04 125 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 GPR21Q99679 349 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 STMN4Q9H169 189 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 CAB39LQ9H9S4 337 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 SNX15Q9NRS6 342 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 TRNAU1APQ9NX07 287 aaKnown RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 TRMT6Q9UJA5 497 aaKnown RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 DHRS7Q9Y394 339 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 GPSM3Q9Y4H4 160 aa18.32■□□□□ 0.52
MCF2L-230ENST00000491028 PCYT1BQ9Y5K3 369 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-230ENST00000491028 AGPSO00116 658 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 LIN7AO14910 233 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CSF2P04141 144 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 NME1P15531 152 aaKnown RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 ITGB6P18564 788 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 AOAHP28039 575 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CCR7P32248 378 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CTSKP43235 329 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CSRP3P50461 194 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 ARHGAP8P85298 464 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 TIAL1Q01085 375 aaKnown RBP eCLIP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 PLOD1Q02809 727 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 DMPKQ09013 629 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 ZNF658BQ4V348 819 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 PLEKHS1Q5SXH7 462 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 KCTD16Q68DU8 428 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 CHST15Q7LFX5 561 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-230ENST00000491028 OTOAQ7RTW8 1153 aa18.31■□□□□ 0.52
MCF2L-230ENST00000491028 AMZ2Q86W34 360 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms